Thalassobellus suaedae: RHP49_03605
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Entry
RHP49_03605 CDS
T10801
Symbol
gatB_aspS
Name
(GenBank) bifunctional amidotransferase subunit GatB/aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tsx Thalassobellus suaedae
Pathway
tsx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RHP49_03605 (gatB_aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsx01007
]
RHP49_03605 (gatB_aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsx03016
]
RHP49_03605 (gatB_aspS)
03029 Mitochondrial biogenesis [BR:
tsx03029
]
RHP49_03605 (gatB_aspS)
Enzymes [BR:
tsx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RHP49_03605 (gatB_aspS)
Amino acid related enzymes [BR:
tsx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RHP49_03605 (gatB_aspS)
Transfer RNA biogenesis [BR:
tsx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RHP49_03605 (gatB_aspS)
Prokaryotic type
Other AARSs
RHP49_03605 (gatB_aspS)
Mitochondrial biogenesis [BR:
tsx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RHP49_03605 (gatB_aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2d
tRNA-synt_2b
Abhydrolase_11
Motif
Other DBs
NCBI-ProteinID:
WNH13347
LinkDB
All DBs
Position
816112..819453
Genome browser
AA seq
1113 aa
AA seq
DB search
MELEQINEALKAHDLELVIGLETHVRLNTKTKLFCSCPNQEIDTPNQNICSVCTGQMGVL
PAINKEAITKAIYFGKAVKSSFENEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGQVSC
YRNDGSQFTVNLTQVHIEEDAAKLMHEKKTSLVDFNKAGVPLIEIVTEPCIRHIEDASTY
AQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKHSYKLNPRTEIKNLNSFKFMVDALKE
EVEKQLNYFLEHKEFRPDQTTVLWDAELKQTKTMRKKEFEADYRFISEPDLPFVSIKDVV
ESIDVDLSTLPYAVESILIKGGVLPQDAKFFTADSLRSETFIAINNIIRDPSFVAKTLVN
NIGADEYADIHRIEHLIEIFQLFKDEKITSVLVQNAITSYLKDRSFDYNKYFEDNTISES
QIKEAIQKVISENEAVANDIKNGNQGKAGILVGKVIAIIGKGASGKVIRQGIINAVATSG
GVGNGMSNIKDSSAQKANNQEPKALTEETLPEIPLIIKEEYRTHKISDLSESSISETVTL
AGWVSSVRDHGELMFIDLRDSSNEIFQVRLSRESFANLDDLVKLKPESVITVTGTVVQRK
EDDYNASLRAGTIELETSDLDILNLSKTLPFEIKRATKTNESVRFQYKYLDHRNDDVRRA
IVNRHKVIKLMRDILDEQEFLEVETPILTAGTDEGAREFIVPTRKKAGSFYTLPQAPQQF
KQILMVSGYEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDLNTKMFNNIVS
KIYGKKWILHPFEIITYKDAMDKYGCDRPDLRFGLQMEDITAIVKETTFQVFSKPIDDGG
IVKCIKVSKEEQGKKRLSKGQIEKLTATAQQHGLGGLAYIIVNENDLQSPIIKFLGEDIA
AGIIKATNAQVGDIVFFSAADYETANKALDAVRQELGAMLKLINPKELRPAWVVDFPMFE
KTDEGRWTFTHNPFSMPAIYDIDKHMNGKEDEIGTIIAQQYDLILNGYEIGGGSVRAHKP
EILEATYKNMGYNKEEMLKSVGTMYEAFHYGAPPHGGIAWGVDRLMMILEKKASIREVMA
FPKTGTSEDLLFGSPSPLSDKKVEEMNVRVIRK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggaattagagcaaataaacgaggctttaaaagcccacgatttagaattggtaatcgga
ctggaaacacacgttagattaaacaccaaaaccaagttattttgttcttgtccaaatcaa
gaaatagataccccaaaccaaaacatttgttcagtttgtactggacaaatgggcgtttta
cccgccataaataaagaggccataacaaaggctatttattttggaaaagctgtaaaatct
tcttttgaaaacgaagtgatttcctgggatagaaaacattatgaataccctgataacccg
aaaaacatacaaattacgcagtttcataaccccgttattccagacggtcaagtttcttgt
taccgtaatgacgggtctcaattcactgtgaatttaacacaagttcatattgaggaagat
gctgctaaattgatgcacgaaaagaaaacatctttagtcgattttaacaaagcaggagta
ccacttattgaaattgttacagaaccatgtattcgtcatattgaagatgcttcaacttat
gcgcaatacattcagcgtattgttcagaatttaaaaataagcgaagctaatcttgaaaaa
ggagagtttaaatcggatgtttcagtatcgcttcgtaaaaaacacagctacaaattaaat
ccacgtaccgaaataaaaaacctaaactcttttaagtttatggttgatgctttaaaagaa
gaagtcgaaaagcaactcaactactttttagagcataaagaatttagaccagaccaaact
acggttttatgggatgctgaattaaagcaaaccaaaaccatgcgtaaaaaagagtttgaa
gcagattaccgctttatttctgaacctgatttgccatttgtttctatcaaagatgttgtt
gaatctattgatgtagatttaagcacacttccttatgccgtagaatctattttaataaaa
gggggtgttttgccacaagacgctaaattttttacagccgattcgttacgctcagaaact
tttattgctataaataatataataagagacccgtcttttgttgctaaaacattagtaaat
aatattggtgccgatgaatatgccgacatacatagaatagagcatcttattgaaattttt
cagctttttaaagatgaaaaaataacatctgtattagttcaaaatgcaattacttcctat
ttaaaagatagaagttttgattacaataagtattttgaagacaatactatttcggaatct
cagattaaagaagcaattcaaaaagtaatttctgaaaatgaagccgttgccaacgatata
aaaaatggaaaccaaggaaaagctggaattctagttggaaaagtcattgccattattggt
aaaggcgcttcaggaaaagtgattcgccaaggaattattaatgcagtagctactagtggc
ggagttggaaacggaatgtctaacataaaagactcttctgctcaaaaagcaaataaccaa
gaaccaaaagctttaacagaagaaacacttccagagattccgttaatcattaaagaggag
tacagaacacataaaatatctgatttatcagaaagttcaatttcagaaactgtaacactt
gctggctgggtatctagtgtacgtgaccatggtgaattgatgtttatagatttacgtgat
tcgagtaacgaaattttccaagtacgtttaagcagagagtctttcgctaatctagatgat
ctggtaaagttgaaaccagaatcggttatcacagttacaggaacggttgttcaacgtaaa
gaagatgattataatgcatcacttagagcaggaaccatagaattagaaacatcagattta
gatattttaaatctatctaaaaccttgccgttcgaaattaaaagagcgacaaaaactaat
gaatctgttcgttttcaatataaatatttagatcacagaaatgacgatgttcgaagagct
atagttaatcgtcataaagtgattaaattgatgcgtgatattttagacgagcaagaattt
ctagaagtagaaacaccaatactaacagcgggaaccgatgaaggcgcaagagagtttatt
gtgccaacaagaaaaaaagcaggatctttttacacattaccacaagcacctcaacaattc
aaacaaattttgatggtgtctggttatgagaaatatttccaaatagcacgctgttttaga
gatgaagattctcgtggcgatcgtcagccagaattcacacagttagatatagaaatggca
tacgccagtatgcagcaaattatagatttaaacacaaaaatgtttaataacatcgtatcg
aaaatatatggtaaaaaatggattttacatccgtttgaaatcattacctataaagatgct
atggataaatatggttgcgacagacctgatttacgcttcggattacaaatggaagacatt
actgccattgtaaaagaaaccaccttccaagtatttagcaaacctattgatgatggtggt
attgtaaaatgtattaaagtttcaaaagaagaacaaggtaaaaaacgcttatctaaaggg
caaatagaaaaactaacagctaccgctcaacaacacggtttaggtggcttagcatatatt
attgtaaatgaaaatgatttacaatcgccaataattaaattcttaggtgaagatattgct
gcaggaattattaaagctacaaatgctcaagttggtgatattgtgttcttttctgctgcc
gattatgaaaccgctaacaaagcattagacgctgttcgtcaagaattaggagccatgtta
aaattaattaatcctaaagagttaagaccagcttgggtcgttgatttcccaatgtttgaa
aaaacagatgaaggtcgttggacatttacacacaacccgttctctatgccagcgatctat
gatattgacaaacacatgaatggtaaagaagatgaaattgggaccatcattgctcaacaa
tacgatttaatactcaatggttacgaaattggaggaggctccgttcgtgctcacaaacca
gaaatattagaggctacctataaaaacatgggttataataaagaggaaatgcttaaaagc
gtgggtactatgtacgaagctttccattatggcgcaccaccacacggcggtattgcttgg
ggagttgatagattaatgatgattttagagaaaaaagcatctattagagaagttatggcg
ttccctaaaacaggcactagtgaagatttattatttggctcaccttctcctttatctgac
aaaaaagtagaagaaatgaatgttagagtaatccgcaaataa
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