Thalassobellus suaedae: RHP49_03725
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Entry
RHP49_03725 CDS
T10801
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tsx Thalassobellus suaedae
Pathway
tsx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHP49_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsx03021
]
RHP49_03725
03400 DNA repair and recombination proteins [BR:
tsx03400
]
RHP49_03725
Enzymes [BR:
tsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHP49_03725
Transcription machinery [BR:
tsx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHP49_03725
DNA repair and recombination proteins [BR:
tsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHP49_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WNH13371
LinkDB
All DBs
Position
complement(847201..848193)
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDYEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSAIAGVVEDVTEIILNLKQARFKRQIEDIDNESISISISGQEQITAGDFQKFIS
GFQVLNTELVICNLDPKVNFNMEITIEKGRGYVPAEENKKASAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSITPQDALTEGAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcaaaagcccgataaggtaatcatgattgattctaccgattat
gaggggaaatttgaatttagacctttagaaccaggttatggtttaacagttggaaatgct
ttaagaagagttttattatcttcattagaaggatttgcaattacatcagttagaattgaa
ggtgtagaccatgagttttctgcaattgcaggtgtagttgaagatgttacagaaatcatc
ttaaacttaaaacaagctcgttttaaaagacaaattgaagatattgataacgaatcaatt
tctatttctatttcaggtcaagaacaaattacagctggagattttcaaaaatttatttca
ggattccaagttttaaatacagaattagttatctgtaacttagatcctaaagttaatttc
aacatggaaatcacaattgaaaaaggtagaggttatgtacctgcagaagaaaataaaaaa
gcatctgcaccaataggtacaatctttacagattcaatttacacacctataaagaatgtt
aagtatagtattgaaaactatcgtgttgaacaaaaaacggattatgaaaaattagttttt
gaaatcattactgatggatcaattacgccacaagatgctttaacagaaggtgctaaaact
ttaattcatcacttcatgttattctctgatgagcgtattacattagaagctgacgaaata
gcacaaactgaaacttatgatgaagaatctcttcacatgagacagttgcttaaaactaag
ttaatcgatatggatttatctgttcgtgcacttaactgtttaaaagctgcagaagtagat
actttaggagatttagtatcattcaataaaaatgatttaatgaaattcagaaacttcgga
aagaagtctttaacagagcttgaagagcttgtaaatgttaaaggtttaaatttcggaatg
gatttaagcaaatataaattagataaagattaa
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