Thalassobellus suaedae: RHP49_05105
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Entry
RHP49_05105 CDS
T10801
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tsx Thalassobellus suaedae
Pathway
tsx03030
DNA replication
tsx03430
Mismatch repair
tsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHP49_05105 (dnaE)
03430 Mismatch repair
RHP49_05105 (dnaE)
03440 Homologous recombination
RHP49_05105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsx03032
]
RHP49_05105 (dnaE)
03400 DNA repair and recombination proteins [BR:
tsx03400
]
RHP49_05105 (dnaE)
Enzymes [BR:
tsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHP49_05105 (dnaE)
DNA replication proteins [BR:
tsx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHP49_05105 (dnaE)
DNA repair and recombination proteins [BR:
tsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHP49_05105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
IF2_N
DUF6824
Motif
Other DBs
NCBI-ProteinID:
WNH13632
UniProt:
A0ABY9Y5V7
LinkDB
All DBs
Position
complement(1151977..1156365)
Genome browser
AA seq
1462 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDAMGNCIESQDYLVQPEGFNIPY
DAEKIHGISTELAQEQGIPLAEVLEKFNEALGKTKFVVGQNVKFDLNIMGAEFVRGALEN
PLQELPVLDTCTEHTASLCEIPGGRYGKFKLPTLSELHEHLFNVGFSEAHNATADVEATT
RCFFELVRLGEYTKDQLDVQPDYFENFKEANPDTIQLIGLKHINLKRESAKILERIKKAE
GSQISSEEIKQNISELADVDFVHLHNHSQFSVLQSTMGVADIVSVAAEYNMEAVALTDHA
NMMGAFHFVNAVSRHNSSVKAKIAAAEATGEAVTVKEMKPIIGCEFFVCENHLDKSRKDN
GYQIVFLAKNKNGYHNLAKLSSHAFVNGFYYLPRIDKKLIEEYKEDLIVLTGNLYGEVPS
KILNIGENQAEEALIWWKEQFGDDLYVELMRHNQEDENRVNPTLIALANKHNVKLVATNN
TYYKKQGDANAHDILLCVKDGEKQATPIGRGRGYRYGMPNQEYYFKSPDEMKQLFKDIPE
AISNVQEVVDKIEGYQLARDVLLPAFDIPDEFKHEEDLVDGGKRGENAFLKHLTFEGAKK
RYGEELSEEVVERLDFELSVIENTGYPGYFLIVEDFIREARKMDVSVGPGRGSAAGSVVA
YCLWITNIDPLKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIEKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPTMSKLGKIFGLSEKDLASKFRAEDLEK
VNELLNIADGSDLQAETVNLARTLEGSVRNTGIHACGVIITPDDITKFVPVATAKDSDLY
VTQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKAKHDILLDPDTFPLDDEETYALFQ
RGETVGVFQYESPGMQKHLRDLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGDEEIEY
DLPAMEEYLKETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASANGHDAKVLEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKQVTFFMEECKRMKLPVLGPDVNESYYKFSVNKDNAVRFGMGAIKGVGHGAVMT
IVDNRKEDGNYRSIFDIAKRIDLRAANKKAFENLALAGGFDCFENTHRAQYFHREGDGMT
FLEMAIKYAQRYKENENSAQVSLFGDASDVQIAEPEVPPCEEWGTMEKLAQEREVVGVYI
SGHPLDDFKTEMKTFCNATLAMFNDVAPYVNRELVFGGVVTDVQHRVSKQGKGWALFTVE
DYTDSHEFRIFGEEYLKFRHFLMQNNFVYVKTFIRDGWVNKDTGKKSDPRMQFNNFQLLH
DVMEHYAKKLSIQLDIKDLDEQKIKALKELVNMHPGNQMLNFLVYDTKEKIKLSMPSRKQ
KVKVSQELIKELEEQNVVYKLN
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaactactggattaccaaaacgctgggatgccccaatt
accgataccgataattggccacgctgtatacaaatagcatggcaactgcatgatgcaatg
ggtaactgtattgaaagtcaggattatttggtgcaaccagaagggtttaacattccttat
gatgctgagaaaattcatggtatttcaactgaattagcacaagagcaaggtattccatta
gctgaggttttagaaaagtttaatgaggctttaggtaaaactaagtttgtagttgggcaa
aatgtaaagttcgaccttaatattatgggggctgaatttgtacgcggtgctcttgaaaac
ccattacaagaattacctgttttagatacctgtacagagcatacagcaagtttatgcgaa
attccaggtgggcgttacgggaagtttaaattaccaacattatctgagttacacgagcat
ttatttaatgtaggcttttctgaagcgcataatgcgactgccgatgtagaggctactaca
cgttgttttttcgaattggtgcgtttgggtgaatataccaaagaccaattggatgttcaa
cctgattattttgagaattttaaagaggctaacccagatacgattcagcttataggatta
aagcatattaatcttaagcgtgaaagtgctaaaattttagagcgaataaaaaaagctgaa
ggaagccaaatttcttccgaagaaattaaacaaaatatatcggagttagccgatgtggat
tttgtgcatcttcataaccactcccagttttcagtattacaatctactatgggtgttgcc
gatattgtttcggttgcagccgaatataatatggaagcagtagcgctaaccgaccatgct
aatatgatgggagcgtttcactttgtaaatgcagtaagcaggcataatagtagtgttaaa
gctaaaattgcagcagcagaagcaacaggcgaagccgttactgttaaagaaatgaaacct
attattggttgtgaattttttgtttgtgaaaatcatttagataaatctagaaaagataat
ggctatcaaattgtattcttggcgaagaataaaaacgggtatcataatcttgcaaaatta
tcgtcgcatgcctttgtaaatgggttttattatttaccaagaattgataaaaaattaatt
gaagaatataaagaagatttaattgttttaacagggaatttatatggtgaagtaccaagt
aaaatcctgaatattggtgaaaatcaagcagaagaagctctaatctggtggaaagaacag
tttggtgacgatttgtatgtagaattgatgcgccataatcaagaagatgaaaatcgtgta
aatccaactttaatagcattggcaaataagcataatgttaagttggtggctaccaataat
acctattacaaaaagcaaggagatgctaatgcacacgatattttattgtgtgtaaaagat
ggtgaaaaacaggcaactcccataggtcgtggtcgaggttaccgctacggtatgccaaat
caggagtattattttaaatctcctgatgagatgaaacaattgtttaaagatattcctgaa
gccatttctaatgtacaagaagtggttgataagatagaagggtatcaattagcgagagat
gtattattgccagcattcgatatccctgatgaatttaaacatgaagaggatttagttgat
gggggtaagcgaggagaaaatgcgtttttaaaacatttaacttttgaaggtgctaaaaaa
cgatatggagaagaactatcagaagaggttgtagaacgtctcgatttcgaattaagtgtt
atagaaaatactgggtacccaggatattttttaattgtagaagattttattcgcgaagct
cgaaaaatggatgtgtctgtaggtccggggcgtggatcggcagcaggatcggtagttgct
tattgtctttggataactaatatagacccacttaagtacgatttgctttttgagcgtttt
ttaaatccagatcgtgtgagtatgcccgatattgatatcgattttgatgatgaaggtcga
agtcgagttatggattatgttattgaaaaatacggaagtaaccaagtagcacaaattatt
acttacggaaccatggcggcaaagtcgtctattcgagatacagcacgtgttttagattta
ccactttttgatgctgatagaatagcgaagttgattccaaccatgtctaaacttggaaaa
attttcggtttaagcgaaaaagatttagcgagtaagtttcgtgctgaagatttagaaaaa
gttaatgaacttttaaatatagcagatggaagtgatttacaagctgaaacagtaaacctg
gcaagaaccttagaaggttcggtaagaaatacgggaattcatgcctgtggtgttattatc
acgcccgatgatattacaaagttcgttccagtagcaactgctaaagattccgatttatat
gttacccagtttgataactccgttgtagaagatgcgggcttattaaaaatggacttttta
ggattaaaaacgctgactttaattaaggataccgttaaaattgttaaggcaaaacatgat
attttactcgatccagatacttttcctttagatgacgaagaaacctatgcgttattccaa
cgaggtgaaacagtaggtgtattccaatatgaatctcccggaatgcaaaaacatttacgt
gatttaaaaccaacggtgtttgaagatttaattgcgatgaatgctttgtaccgtccagga
cctatggagtatattccaagtttcgttcgtcgtaaacatggtgatgaggaaattgagtac
gatttaccagccatggaagaatacttaaaggaaacttatggtattaccgtatatcaagag
caggtgatgttattgtcccaaagtctcgcaggatttactaaaggtgaagccgatgtattg
cgtaaggcgatgggtaaaaagcagattgcggtactggataaaatgaagccaaagtttatt
gaacaagccagtgcaaatggacatgatgctaaagttttagaaaaagtttggaaagattgg
gaagcctttgcgagttatgcttttaataaatcacactctacttgttatgcttggatagct
taccaaactgcatatttaaaagcgcattatccagcggaatatatggcagcggtattgtcg
aataatatgaatgatattaagcaggttacattttttatggaagaatgtaaacgcatgaag
ttacctgttttaggacccgatgttaatgagagttattataagttctcggtaaataaagac
aatgcagttcgttttggaatgggagctataaaaggggtaggacatggggctgttatgact
attgttgataatagaaaagaagacggtaattatagatctatttttgatatagcaaagcgt
atcgatttacgtgcggccaataaaaaagcattcgagaatcttgcgttagcaggcggattt
gattgttttgaaaatacgcatagagcacaatattttcatagagaaggtgatggtatgacg
tttttagaaatggccattaaatatgcacagcgttataaagaaaatgagaattcggcacaa
gtaagtttgtttggagatgctagtgatgttcaaatagctgagccagaagtgcctccatgt
gaagagtggggaactatggagaaattagcccaagaacgtgaagtggttggggtttatatt
tcgggacatccattagatgattttaaaacagaaatgaaaactttttgcaatgcaacactt
gccatgtttaatgatgtagcaccttatgtgaaccgtgaacttgtatttggtggcgtagta
accgatgtacaacatcgtgtgagtaaacaaggaaaaggatgggcgttatttactgttgaa
gattataccgatagtcatgaatttagaatttttggtgaagaatatttaaaattcagacat
tttttaatgcagaataatttcgtttatgttaaaacatttattcgagatggttgggtaaat
aaagatactggaaaaaagagcgatccacgaatgcagtttaataattttcaattgctgcat
gatgtgatggagcattatgctaaaaagctctcaatacaactggatattaaagatttagat
gaacaaaaaataaaagctttaaaggaattggttaacatgcatcccggaaatcagatgctt
aattttttagtgtacgataccaaagaaaaaataaaattgagtatgccaagcagaaaacaa
aaggtgaaagtatctcaagaattgataaaagagctagaagaacaaaatgtggtttataaa
ttaaattaa
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