Thalassobellus suaedae: RHP49_08620
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Entry
RHP49_08620 CDS
T10801
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsx Thalassobellus suaedae
Pathway
tsx03030
DNA replication
tsx03410
Base excision repair
tsx03420
Nucleotide excision repair
tsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHP49_08620 (polA)
03410 Base excision repair
RHP49_08620 (polA)
03420 Nucleotide excision repair
RHP49_08620 (polA)
03440 Homologous recombination
RHP49_08620 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsx03032
]
RHP49_08620 (polA)
03400 DNA repair and recombination proteins [BR:
tsx03400
]
RHP49_08620 (polA)
Enzymes [BR:
tsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHP49_08620 (polA)
DNA replication proteins [BR:
tsx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RHP49_08620 (polA)
DNA repair and recombination proteins [BR:
tsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RHP49_08620 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHP49_08620 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
RNase_H_2
HHH
Motif
Other DBs
NCBI-ProteinID:
WNH14301
LinkDB
All DBs
Position
complement(1970548..1973397)
Genome browser
AA seq
949 aa
AA seq
DB search
MSDNKRVFLVDAFALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSADRVEMFDAYKANRDETPEAITIAVPIIQDILKAMHIPIMVKTGFEADDVIGT
LAKQAEKEGYQTFMVTPDKDFAQLVSENIFMYRPVFGGGYETWGIPEVLKKFEVTDPLQV
IDFLGMMGDSSDNIPGLPGVGEKTAKKFLAQYGSMENLLANTHELKGKMKEKIEANGELG
MLSKKLATIMLDVPVTFNAKDFELNHPDIPKVIEIFQELEFRRLIDNFTKTFSVETPPVA
VEKTSEKAEVKATPKESASAGAGQFSLFGADPSSATKTETVSEFARKTAETRSHFYQSVS
PGMATKLFIKNLMNQTSVCFDTETTGLNPLIAELVGIAFSWETGKGFYLPFPESKEEAQE
LIEQLRPFFESDSIQKIGQNLKYDIKVLAKYNITVKGKLFDTMLAHYLINPDMRHNMDVL
AETYLNYTPISITELIGKKGKNQLSMRDVPLEKQTEYAVEDTDITLQLKEHFEKELGDAN
TQKLFDDIEIPLLRVLAAMEVEGINLDVAFLNSLSEDLNNDIKTLEAKIYETAGEEFNIA
SPKQLGIILFEKLKLVDKPKKTKTGQYATGEDILSYLAKEHDIIQNILDYRGLAKLKSTY
VDALPTQVEEATGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRNDDY
ILLAADYSQIELRIIAALSKEKTMIEAFKNGEDIHASTASKVFNVPLEDVTREQRSNAKT
VNFGIIYGVSAFGLSNQTDLSRGEAKELIDTYYETYPKLRAYMNEQVDFARDYGYVQTVL
GRRRYLKDIDSRNAVVRGAAERNAVNAPIQGSAADIIKIAMINIYNKLETGNYKTKMLLQ
VHDELVFDVYKPELETIKTLVKTEMENAFIMDVPLDVEVGIGADWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaataaacgtgtctttttagttgatgcctttgcattaatttttcgtggctat
tatgcctttataaaaaaccctagaatcaattcaaaaggattagacacctcagctatcatg
gggtttatgaattcgctcctagatgttataaaacgagagcgcccagaccatttagccgtt
tgtttcgataaaggcggaagtgccgatagggttgaaatgtttgatgcttacaaagccaac
agagatgaaacaccagaagccataacaattgctgtccctattattcaagatattttaaaa
gccatgcatattcctattatggttaaaactggttttgaagccgatgatgttataggtaca
ctggcaaaacaagccgaaaaagagggttaccaaacgtttatggtcacaccagataaggat
tttgcacaattagtttctgaaaatatttttatgtatcgccctgtttttggtggcggttac
gaaacttggggcattccagaggttctgaaaaaatttgaagtgacagacccattacaagtt
attgactttttagggatgatgggcgactctagcgataatattcctggactgcctggtgtt
ggcgaaaaaacagccaaaaagtttttagcacaatatggaagcatggaaaaccttttagcc
aatacgcatgaacttaagggtaaaatgaaagagaaaattgaagctaatggcgaattagga
atgctttctaaaaaactagccactatcatgctagatgttcctgttacttttaatgctaaa
gattttgaattaaatcatcccgatatcccgaaagtcattgagatttttcaagaattagag
tttagacgcttaatagataattttactaaaacattttcagttgaaacaccgcctgttgct
gttgaaaaaacttcagaaaaagcagaagtaaaagcaacacctaaagaaagtgcttcggca
ggtgctggacagttttcattgtttggagcagacccttctagtgctactaaaaccgaaact
gtttcagaattcgccagaaaaacagcagaaactaggtcgcatttttaccaaagtgtatca
ccaggtatggcaactaaactattcattaaaaatttaatgaatcaaacctcggtatgtttt
gataccgaaaccacaggtttaaatccgctaattgcagaactagtaggtattgccttttca
tgggaaacaggcaaaggtttttatttaccttttccagaaagcaaagaagaagctcaagaa
cttatagagcaattgcgtccgttttttgaaagtgacagcattcagaaaattggtcagaat
ttaaaatacgatattaaagtccttgctaaatataatattacagtaaaaggaaaattattc
gataccatgctagcgcattatctcatcaatccagatatgcgacataatatggatgtatta
gccgaaacgtatttaaactatacgcctatttctattacagaattaattggcaaaaaaggc
aagaatcaattatccatgcgtgatgttccgttagaaaagcaaaccgaatatgccgttgaa
gataccgatatcacactacaacttaaagaacattttgaaaaagaattaggagacgctaat
actcaaaaactgtttgatgatattgaaatcccgttgcttcgagtattagctgctatggaa
gttgaagggattaatttagatgttgcttttttaaactccctttctgaagatttaaataac
gacattaaaaccttagaagcaaaaatctatgaaaccgctggtgaggagttcaatatcgca
tcgccaaaacagttgggtattattctttttgaaaaactaaaattagttgacaagccgaaa
aaaacgaagacaggacaatatgccacaggcgaagatattttatcctatttagcaaaagag
cacgacattattcaaaatattttagactatcgcggattagcgaaactaaaaagcacttat
gtagatgctttaccaacacaggttgaagaagctacaggacgtgtacataccgattatatg
caaactgttgctgctacagggcgtttaagtagtaataatccgaatttgcagaacattcct
attcgtaccgaacgtggaagacaagtgagaaaggcattcatccctagaaatgacgactac
attttattagctgcggattattcgcaaatagaacttcgaattattgctgctttaagtaag
gaaaaaaccatgattgaggcttttaaaaacggtgaagatattcacgcgtctaccgcttca
aaagtatttaatgtgcctttagaagacgtaactcgtgagcaacgtagcaatgcgaaaact
gtaaacttcggaattatatatggggtatctgcttttgggcttagcaatcaaaccgattta
tctcgtggtgaagccaaagagcttattgatacttattatgaaacgtatccaaagcttcga
gcctacatgaatgagcaagtcgattttgctcgcgattacggttatgtacaaaccgttttg
gggcgccgtcgttatttaaaagatatcgattctcgtaatgccgttgttcgaggtgcagca
gaacgtaatgccgttaacgctcctattcaaggtagtgctgccgatattattaaaattgcc
atgattaatatttataataaactagaaacaggcaactataaaaccaaaatgcttttacaa
gtacatgatgaattggtttttgatgtttataaacccgaactagaaaccattaaaacctta
gttaaaactgaaatggaaaatgcatttattatggatgttcctttagatgttgaagttggt
attggtgctgattggctggaggcgcattaa
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