Thalassobellus suaedae: RHP49_09390
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Entry
RHP49_09390 CDS
T10801
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsx Thalassobellus suaedae
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsx03032
]
RHP49_09390 (topA)
03400 DNA repair and recombination proteins [BR:
tsx03400
]
RHP49_09390 (topA)
Enzymes [BR:
tsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHP49_09390 (topA)
DNA replication proteins [BR:
tsx03032
]
Prokaryotic type
DNA Topoisomerases
RHP49_09390 (topA)
DNA repair and recombination proteins [BR:
tsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHP49_09390 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RP-C
Motif
Other DBs
NCBI-ProteinID:
WNH11135
LinkDB
All DBs
Position
2161071..2163560
Genome browser
AA seq
829 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSFGHISDLPSKELGVNVDGDFKPTYEVSKDK
KAVVKKLKDLAKKADWVWLASDEDREGEAIAWHLAETLKLDKDKTKRIVFHEITKSAIQK
AIENPRGIDYDLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
DIQNFTPEASYRIDAEFSNEDGQSFKAKLPKTFSSKEAAYKFLESNKAASFKVADLQKKP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGLITYMRTDSVNLSDEARNGA
QAEIESAYGSKYSKPRNYKGKAKGAQEAHEAIRPTNFAVHSVDIDYDQARLYDLIWKRAI
ASQMSEAELERTNVKISASTHKETFTANGEVITFDGFLKVYLEGTDDEDAEQEGMLPAMK
TNETLLNSYITATERYTRAPARFTEASLVKKLEELGIGRPSTYAPTISTIQNRNYVEKGA
VEGVEREYTQLKLQNDNLTDTMLSEKVGSDKGKLVPTDIGMIVTDFLVNHFENILDYNFT
AKVEADFDDIADGKEDWIKMMKSFYKDFHPIVEDVKENADRESGERILGTDPKSGKQVSV
RLGKFGPMVQIGTVDDEEKPQFASLSPDQQLNTITYEEAMDLFQLPKSLGEYKGEDILVN
NGRFGPYVKFGDSFVSLPKGVDPLSVELDDAIVLIKEKQKADAPIYMYKDLPVQKGKGRF
GPFIKWNNMFINVNKKYDWDNLSDEDIIELIETKIQKEIDKVIHNWEDEGIRVEKARWGR
HNVLKGKIKVELPKTVDVSEMTLEEAKAIIEAKTPKKKATKKKTTAKKK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttagtgattgttgagtcacctgctaaggcaaaaactattgaaaaattt
ttaggaaaagattttaaagtagaatctagttttggacatatatccgatcttccttctaag
gaattaggggtaaatgtagacggtgattttaaaccaacatatgaagtttcaaaagataaa
aaggcagttgtaaaaaaactgaaagatttagctaaaaaagcagattgggtatggctagca
agtgatgaagatcgcgagggtgaggctatagcatggcatttagctgagactttaaaatta
gacaaagacaagacaaaacgtattgtttttcatgaaatcactaaatcggctattcaaaaa
gctattgaaaacccaagaggtatagattatgatttagtagatgcgcaacaagcacgtcgc
gtattagataggattgtaggttatgaattgtcgccagtactttggagaaaagtaaaagga
ggcttatcggcaggtcgtgtacagtctgtttctgtgcgcttaattgtagaacgagaacga
gatattcaaaactttacaccagaagcttcttatagaattgatgcagagttttcaaatgaa
gacggacaatcttttaaagcaaaactacctaagacgttttcatctaaagaagctgcttat
aaatttttagaatcaaataaagcagctagttttaaagttgcagatttacaaaaaaaacct
gcaaaaaaatcaccagcagcaccgtttacaacttctactttacaacaagaagcatcgcgt
aaattatatttttcggtaagtaaaaccatgactatggctcagcgcttatatgaggctgga
cttattacttatatgagaacagatagtgtaaatttatctgatgaagcaagaaatggagcg
caagcagaaatagaaagtgcttatggttctaagtatagtaaacctagaaattacaaagga
aaagcaaaaggagcacaagaagcgcatgaggctataagacctactaacttcgctgtgcat
tctgtagatatagattatgatcaagcacgattatacgatttaatctggaaacgtgctatt
gcttctcaaatgagtgaagcagagctagagcgcaccaatgtgaaaattagtgcctcgaca
cataaagaaacatttacagctaacggtgaggttattacttttgatggctttttaaaagta
tatttagaaggtaccgatgatgaagatgctgagcaagaagggatgttgccagcaatgaaa
actaatgaaactttactaaatagttatattactgccacagagcgttacacacgtgcgcca
gcaagatttacagaagcatcactagttaagaagttggaagaattaggtattggtcgtccg
tcaacttatgcgccaactatttcaactattcaaaatagaaattatgttgaaaaaggagct
gttgaaggtgtggagcgtgaatatactcaacttaaattacagaatgataatttaacagat
accatgctctctgaaaaagtaggttctgataaaggaaaactagtgccgacagatataggg
atgattgttaccgactttttggtaaatcattttgagaatattttagattataattttaca
gctaaagtagaagctgattttgatgatatcgcagatggaaaagaggattggattaaaatg
atgaaatcgttttataaagattttcatcctattgtagaagatgttaaggaaaatgctgat
agagaatctggagagcgtattttaggaaccgatccaaaatcggggaaacaggttagtgtg
cgtttaggtaagtttggacctatggtgcaaataggaacggttgatgatgaagaaaaacca
caatttgcaagtttaagtccagaccaacaattaaacacgattacttatgaagaagctatg
gatttatttcagcttccaaaaagtttaggtgaatataaaggagaagatatactcgttaat
aatgggcgttttggaccttatgttaagtttggagattcttttgtgtcacttccaaaaggt
gttgatcctttaagtgtggagttggatgatgctattgttttaattaaagagaaacaaaaa
gctgatgctccaatatatatgtataaagatttacctgttcaaaaaggtaaagggcgtttt
ggaccatttattaaatggaacaatatgtttataaacgtaaataaaaaatacgattgggat
aacctatctgatgaagacattattgagttaattgaaactaaaattcaaaaagaaatcgat
aaggtcattcataattgggaagatgaaggtattcgtgttgaaaaagcacgctggggcaga
cataatgttttaaaaggaaaaataaaggttgaattacctaaaactgtagatgtttctgag
atgactttagaagaagctaaagcaataatagaagcaaaaacaccaaaaaagaaagctaca
aagaaaaaaacaacggctaaaaagaaataa
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