Thalassobellus suaedae: RHP49_10505
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Entry
RHP49_10505 CDS
T10801
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tsx Thalassobellus suaedae
Pathway
tsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHP49_10505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsx03019
]
RHP49_10505
03016 Transfer RNA biogenesis [BR:
tsx03016
]
RHP49_10505
Enzymes [BR:
tsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RHP49_10505
Messenger RNA biogenesis [BR:
tsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHP49_10505
Transfer RNA biogenesis [BR:
tsx03016
]
Prokaryotic type
tRNA degradation factors
RHP49_10505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WNH11339
LinkDB
All DBs
Position
complement(2470749..2472998)
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AA seq
749 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQADVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQVMIQLMS
HDDEVMPDAMAGLAASAAIQLSDFPFECPISEARVGRVNGEFVINPTRAQLLESDIDMMI
GASADSVMMVEGEMDEISEEEMTEAIKFAHEAIKVQCAAQVALAEAFGKKEVREYEPERE
DEELAQKIHDMAYDKVYAVAKAGSAKHERSAAFAEIKEAIKATFSEEELADIGGLISKYY
SKAEKTAVRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSREANQIDMPSFEGEERFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLITDVNSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQARDGRIHILGKL
TDTIAAPNTDVKEHSPKMITRRIPNEFIGALIGPGGKVIQELQKETNTTIVINEDPVTEE
GIVEILGVGNEGIDAVQAKIDSLLFKPTVGNVYQVKVIKMLDFGAVVEYIDAPGNEVLLH
VSELAWERTENVTDVVNMGDVFDVKYFGVDPRTRKEKVSRKAILPKPEGYVARPPRENND
RGGRDNRGRDNRGRDNRRDDRKPREDKRD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtttttagagaggttatagaccttggtgacggtagagaaatttctatc
gaaactggaaaattagcaaaacaagcgcatggtagcgttgtggtgcaatctggaaaatgt
atgttactatgtacagttgtttccaattacaaacaagcagatgttgattttttaccgtta
acggtagattacagagaaaaatttgctgcagcaggacgttatcctggaggtttctttaaa
agagaagctagaccaagtgatggcgaagttttaacaatgcgtttagtagaccgtgtttta
cgtccgttattcccaaaagattatcattcagaaactcaggtgatgattcagttaatgtct
catgatgatgaggttatgccagatgctatggcaggtttagctgcatcagcggctattcaa
ttatctgattttccttttgaatgtccaatttctgaagctagagttggccgtgtaaatggt
gaattcgttatcaatccaactagagctcaattattagaatctgacatcgatatgatgatt
ggtgcttctgccgattctgttatgatggttgaaggtgaaatggatgagatttctgaagaa
gaaatgactgaggcaatcaaatttgctcacgaagctattaaagtacaatgtgctgctcaa
gtagctttagctgaggcttttggcaaaaaagaagtacgtgaatacgagccagaaagagaa
gatgaagagctagctcaaaaaattcatgatatggcatacgacaaagtatatgctgtagca
aaagcaggttctgctaaacatgaaagaagtgctgcatttgctgaaattaaagaagcgata
aaagcgacgttttctgaagaagaattagcagatattggtggattaatttctaaatattat
agtaaagctgaaaaaacagcggttagagatttaacattaaacgaaggtttacgtttagat
ggtcgtaagactgacgagattagaccaatttggtgtgaggttgattatttaccatcaact
catggttcagctatctttacacgtggagaaactcaagccttagcaacggttactttagga
acaagtagagaagctaaccaaatagacatgccatcttttgaaggtgaagaacgcttctat
ttacactataacttccctcctttttcaacaggtgaagcaagacctatacgtggaacatct
cgtagagaagttggacacggtaacttagcgcaacgagctttaaaaggtatggttcctgaa
gattgtccttatactgttcgtgtagtttcagaagtattagaatctaatggctcgtcttct
atggcaactgtttgttctggtacaatggcgcttatggatgctggggttcaattaaagaaa
cctgtttcgggtattgctatgggactaattacagatgttaattctggaaaatacgctgta
ttatctgatattttaggtgatgaagatcacttaggagatatggactttaaagtaactggt
actgccgatggtattactgcttgccaaatggacattaaagtaaaaggattatcttatgaa
attcttgtcaatgcgctaaaacaagcacgcgatggacgtatacacattttaggtaaatta
acagatacaattgctgctcctaatacagatgttaaagaacattctccaaaaatgattacc
agaagaattcctaacgaatttattggtgcattaattggtcctggtggaaaagtaatccaa
gaattacaaaaagaaaccaatacaactattgttattaacgaagatcctgttactgaagaa
ggtattgttgaaatattaggtgttggtaatgaaggtattgatgctgttcaagcaaaaata
gactcattattatttaaaccaactgttggtaatgtttaccaagtaaaggttattaaaatg
cttgattttggtgctgtagtagaatatattgatgctccaggtaacgaagttttattacat
gtaagtgaattggcttgggaacgtactgaaaatgtaacagacgttgtaaatatgggtgat
gtttttgatgtgaagtactttggtgtagacccaagaactcgtaaagaaaaagtatctcga
aaagctattttaccaaaaccagaaggttatgtagcaagaccacctagagaaaacaatgat
cgtggtggacgcgacaacagaggtagagataatcgcggacgcgataaccgtcgtgatgat
agaaaacctagagaagacaagagagattaa
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