Thalassobellus suaedae: RHP49_13895
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Entry
RHP49_13895 CDS
T10801
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsx Thalassobellus suaedae
Pathway
tsx03030
DNA replication
tsx03430
Mismatch repair
tsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHP49_13895
03430 Mismatch repair
RHP49_13895
03440 Homologous recombination
RHP49_13895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsx03032
]
RHP49_13895
03400 DNA repair and recombination proteins [BR:
tsx03400
]
RHP49_13895
Enzymes [BR:
tsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHP49_13895
DNA replication proteins [BR:
tsx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHP49_13895
DNA repair and recombination proteins [BR:
tsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHP49_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
GIY_YIG_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WNH11981
LinkDB
All DBs
Position
complement(3294702..3296045)
Genome browser
AA seq
447 aa
AA seq
DB search
MIYTVIDVETTGIGNKITEISIFRYENNVLIDEFTSLVNPERLIPDYITTLTGIDDFMVA
KAPVFSEISESILSITKDAIFIAHSVNFDYNVIRNEFKSIGVHFNRKKLCTVRLSRKLLP
GHKSYSLGKLCDTLDIPIVGRHRARGDAEATVILFKLLLEQPNSQEVIQSFFKKDSKETT
LPQHLKQETFDQLPNATGVYYFKDKKGKIIYVGKAKDIKKRVLSHFYSKIEKELNLSRET
TDVDFELSGSETIALLMEDAAIKHHFPKYNEAAKRIPKAYAIFSYQDRNGIIHLAYNTHK
SIPHAIQILYSIQECRYYMESICKQFNLCPKYCHLQEGVTYCSHYSIKSCKGVCKETESK
ALYNIRVNQAIDYLKNMSKDVILKQQGRHENEEAFIMIQNSIYRGYGFIDKNEQINTSED
LELFLIPQKDNVDIQRVLKKMVLESQN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatatatactgtaatcgatgttgaaacaactggtattggaaataaaattactgaaatc
tccattttcagatatgaaaacaatgtattgattgatgagtttacatcccttgttaatcca
gaacggctcattcccgattacataacaactttaactggaattgatgattttatggttgct
aaagcgcctgtattttctgagatttcagaatctattctatccattactaaggatgccatt
tttatagcacacagcgttaattttgactacaatgtcattcgtaatgagtttaaatccatt
ggagttcattttaatagaaagaaactttgtactgttagactatccagaaaattattacct
ggtcataaatcttacagtctaggaaaattatgcgatacattagatatacctattgttggt
agacatcgtgccagaggtgatgcggaagccacagttatcctttttaaattattattagaa
caaccaaattcccaagaagttattcaatccttttttaaaaaagactccaaagagactacg
ctacctcaacatttaaaacaagaaacttttgaccaacttcccaacgctacaggagtttat
tattttaaggataaaaaagggaaaattatttatgttggaaaagcaaaagatattaaaaag
cgagtattaagccatttttacagtaaaatagaaaaggaacttaatctatctagagaaact
actgatgtagattttgaactctcaggaagtgaaacaattgctttattaatggaagatgcc
gctattaagcatcatttccccaaatataatgaagctgccaaacgcattccaaaagcttat
gccatatttagttaccaagatagaaatggcattattcatttagcttataatactcataaa
tcaataccacatgccatacaaatattatatagtattcaagagtgtcgttattatatggaa
tccatttgtaagcaatttaatctatgtccaaaatactgtcatttacaagaaggtgttacg
tattgttcgcattattcaattaaatcttgcaaaggggtttgtaaagaaactgaatctaag
gcattatataatattcgtgttaatcaagccatagattatcttaaaaacatgtccaaagat
gttatcttaaaacaacaaggtagacatgaaaatgaagaggcttttattatgattcaaaat
agcatttatcgtggatatggttttattgataaaaatgaacaaattaatacttcggaagat
ttagagctgtttctcataccccaaaaagataatgttgatattcaaagggtcttaaaaaaa
atggtattggaaagtcaaaattaa
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