Candidatus Thiodictyon syntrophicum: THSYN_00895
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Entry
THSYN_00895 CDS
T05211
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THSYN_00895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tsy02022
]
THSYN_00895
02035 Bacterial motility proteins [BR:
tsy02035
]
THSYN_00895
Two-component system [BR:
tsy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
THSYN_00895
Bacterial motility proteins [BR:
tsy02035
]
Pilus system
Twitching motility proteins
THSYN_00895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
cREC_REC
HTH_50
HTH_30
AAA_22
PG_1098_Fer
Pre_tape_measure
HTH_23
AAA_7
Maf_N
Motif
Other DBs
NCBI-ProteinID:
AUB79655
UniProt:
A0A2K8U2A0
LinkDB
All DBs
Position
211865..213211
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AA seq
448 aa
AA seq
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MNKAHALVVDDEADILDLLKITLGRMDVQATTAMTVAEAKTALQARRYDLCLTDMNLPDG
SGIDLVRFIVERHPDLPVAMITAHGSMESAVAAMKAGAFDFVSKPVDLQLLRRLVGSALK
LRTHGGAAEARTESGTRLLGDSPKVEEIRRLVAKLARNQAPVFITGESGTGKELAARLIH
AQGPRAEGDFVAVNCGAIPQELVESELFGHKKGSFTGAVADKEGLFQAAEGGTLFLDEVA
DLPLPAQVKLLRAIQEKSVRPVGAQQELAVDVRIISASHRDLNEEVEKGRFRQDLFYRIN
VIEMRMPALREHPQDIPALAARIMERIARQHADREAMRLSEEAVEALARHPFPGNVRELE
NVLERATALCDGSIIGAHDLYLPQTEAQVAVGSHADPEVPLEDYLGEIERHAILKALDDT
RWNRTAAAKKLGMTLRALRYRLAKLGIE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcccacgccctcgtcgtcgatgacgaggccgacatcctcgacctgctcaag
atcaccttgggtcgcatggacgtgcaggcaaccacggccatgacggtggccgaggccaag
acggcgctgcaggcacggcgctacgacctgtgcctcaccgacatgaacctgccggacggc
agcgggatcgatctggtgcgcttcatcgtcgagcgccaccccgatctgccggtcgccatg
atcactgcccacggcagcatggaatcggccgtcgccgcgatgaaggccggcgccttcgac
ttcgtctccaagccggtggatttgcaactgctgcgccgcctggtgggatcggcgctcaag
ttgcgcacccacggcggcgcggcggaggcgcgcaccgagagcggcacccgcctgctcggg
gactcccccaaggtggaggagatccgccgcctcgtcgccaagctggcgcgcaatcaggcg
ccggtcttcattaccggtgagagcggcaccggcaaggaactggcggcgcgcctgatccac
gcccagggcccgcgggcggagggcgatttcgtggcggtcaactgtggtgccatcccccag
gagctggtggagagcgaactgttcggccacaagaagggcagcttcaccggtgcggtggcg
gacaaggaggggctgttccaggcggccgagggcggcaccctgtttctggacgaggtggct
gacctgccgctgcccgcccaggtcaagctcctgcgggccatccaggagaagagcgtgcgg
ccggtgggggcccagcaggagctggcggtggatgtgcgcatcatcagcgcgagccaccgg
gatctgaacgaggaggtggagaagggccgcttccgtcaggacctcttctaccgcatcaat
gtgatcgagatgcgcatgcccgcgctgcgcgaacacccccaggacatcccggccctggcc
gcgcgcatcatggagcgcatcgcccgccagcacgccgaccgcgaggccatgaggctctcg
gaggaggcggtggaggcgctcgcccgtcaccccttcccaggcaatgtgcgcgagttggag
aatgtgctggagcgcgccaccgcgctctgcgacggctccatcatcggcgcccatgacctc
tacctgccgcagaccgaggcccaggtcgcggtcgggtcgcacgcggaccccgaggtcccc
ctggaggactacctgggggagatcgagcgccatgccatcctcaaggccctggacgacacc
cgctggaaccgcaccgcggccgccaagaagctcggcatgacgctgcgtgccttgcgctat
cgcctggccaagctcgggatcgaatag
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