Candidatus Thiodictyon syntrophicum: THSYN_06470
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Entry
THSYN_06470 CDS
T05211
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsy03021
]
THSYN_06470
Transcription machinery [BR:
tsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THSYN_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
ENT
DUF7769
HTH_Tnp_ISL3
HTH_25
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AUB80631
UniProt:
A0A2K8U6G0
LinkDB
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Position
1514390..1515229
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AA seq
279 aa
AA seq
DB search
MAKDFALMPTGNIDAYISASYQIPVLTPEEERSLAENLRDHGDMEAARRMVMSHLRFVIR
IARGYLGYGLPLPDLIQEGTVGLMKAVRRFEPDMGVRLVSFAVHWIRAEIHEYILRNWRI
VKVATTKAQRKLFFNLRSAKKRLGWFTHAEVLAVAADLGVKPETVLEMESRLSNQDLAFD
GYEDDDDESPSAPSTYLPDSRMEPLRMLEREDTESKDKARLYAAIQGLDERSKVILRERW
LAEKKQTLHELAQQFNVSAERIRQIEKNAMKKLRLQLAV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatttcgctctcatgcccaccggcaatatcgatgcgtacatcagcgcctcc
taccagatcccggtgctgacccccgaggaggagcggagcctcgccgagaacctgcgcgac
catggtgatatggaggcggcgcggcggatggtgatgtcccacctgcggttcgtgatccgt
attgcccgcggttacttgggctacggcctgcccctgccggacctgatccaggagggcacg
gtgggcctgatgaaggcggtaaggcgcttcgagcccgacatgggggtgcgcctggtctcc
ttcgcggtgcactggattcgtgccgagattcacgagtacatcctgcgcaactggcgcatc
gtgaaagtggcgacgaccaaggcccagcgcaagctgttcttcaacctgcgtagcgccaag
aagcggctcggctggttcacccacgccgaggtgctggcggtcgcggccgacctgggggtg
aagcccgagacggtgctggagatggagtcgcgcctctccaaccaggacctggccttcgac
ggctacgaggacgatgatgacgagtccccctccgcgccatcgacctacctgccggattcg
cgcatggagcccctgcggatgctggagcgcgaggataccgagagcaaggacaaggcgcgc
ctctatgccgccatccagggcctggacgagcgcagcaaggtgatcctgcgcgagcgctgg
ctggcggagaagaagcagacgctgcatgaactcgcccagcagttcaacgtgtccgccgag
cggatccgccagatcgagaagaatgcgatgaagaagctgcgactgcaactggccgtctga
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