Candidatus Thiodictyon syntrophicum: THSYN_07520
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Entry
THSYN_07520 CDS
T05211
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy00020
Citrate cycle (TCA cycle)
tsy00190
Oxidative phosphorylation
tsy00650
Butanoate metabolism
tsy00720
Other carbon fixation pathways
tsy01100
Metabolic pathways
tsy01110
Biosynthesis of secondary metabolites
tsy01120
Microbial metabolism in diverse environments
tsy01200
Carbon metabolism
Module
tsy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tsy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tsy_M00149
Succinate dehydrogenase, prokaryotes
tsy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
THSYN_07520
00650 Butanoate metabolism
THSYN_07520
09102 Energy metabolism
00190 Oxidative phosphorylation
THSYN_07520
00720 Other carbon fixation pathways
THSYN_07520
Enzymes [BR:
tsy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
THSYN_07520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_binding_3
GIDA
Lycopene_cycl
NAD_binding_8
Pyr_redox_3
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AUB84686
UniProt:
A0A2K8UGI0
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All DBs
Position
complement(1753958..1755721)
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AA seq
587 aa
AA seq
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MSIPTRHFDALIIGAGGAGLNAALQLATADIHVAVVSKVFPTRSHTVAAQGGVNAALANV
LPDNWHWHMFDTVKGSDYLGDQDAIEFMCREAIPTVYELEHAGVPFSRLDNGKIYQRPFG
GQSQDFGGDQAARTCAAADRTGHAILHTLYQQNIRAKTHFFDEFFALDLVRDKEGIICGA
LVLEIETGEPLLIEATATLLATGGCGQIFRTTSNAHINTGDGCAMTLRAGVPLMDMEFYQ
FHPTGIAGKGMLITEGVRGEGGFLVNKDGERFMERYAPRAKDLASRDVVARSIVTEVKEG
RGAGENGDYIYLKLEHLGADVIEKRLPGIRESSRIFAGADPVREPIPVFPTAHYQMGGIP
TDRFGRVVIPAKYGAEEVISGLYAAGECACASVHGANRLGGNSLLDILVFGRLAGKDIIE
YVRANPHRRETDPVSLEQAMARLTRWERKGEGVPAHQLRAEFRKCMEDHAGVFRTEEVMA
EGYQKLSELRERFKDARLGDQSKVFNTARIEALELENLIDVGLAVAVSALHRKESRGAHS
RPDYPKRDDVNWMKHSLYYRDGDRMDYKRVRTKPLTVESFPPAERTY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcccaaccagacacttcgatgccctgatcatcggcgccggcggcgccggcctg
aacgcggcactgcaactggcgaccgccgacatccatgtggcagtggtctccaaggtcttc
ccgacccgctcccacacggtggcggcccagggcggagtcaacgccgcactcgccaacgtc
ctgccggacaactggcactggcacatgttcgatacggtcaagggctccgactatctcggg
gaccaggacgccatcgagttcatgtgccgcgaggcgatcccgacggtctatgagttggag
cacgcgggcgtgcccttctcgcggctcgacaacggcaagatctaccagcgtcccttcggc
ggccagagccaggacttcggcggcgatcaggcggcgcggacctgcgcggcggcggaccgc
accggacacgccatactgcataccctctatcagcagaatatccgcgccaagacccacttt
ttcgacgagttcttcgcgctcgacctggtgcgtgacaaggagggcatcatctgcggggcc
ctggtactggagatcgagaccggcgagccgctgctgatcgaggccacggcgaccctgctc
gccaccggcggctgcggtcagatcttccgcaccacctccaacgcccacatcaatacgggt
gacggctgcgccatgaccctgcgcgccggggtgccgctgatggacatggagttctaccag
ttccaccccaccggcatcgccggcaagggcatgctgatcaccgagggggtgcgcggcgag
ggcggcttcctggtcaataaggacggggagcgcttcatggagcgctatgccccacgcgcc
aaggacctggcaagccgcgacgtggtggcgcgctccatcgtcaccgaggtcaaggagggg
cgcggtgccggcgagaacggcgattacatctacctcaaactcgaacacctgggcgcggac
gtcatcgaaaagcgcctgcccggtatccgcgaatcgagccgcatcttcgccggggccgat
ccggtgcgcgagcccatccccgtcttccccaccgcccactaccagatgggcggcatcccc
accgaccgtttcggacgggtggtgatcccggccaaatacggcgcggaagaggtcatctcc
gggctctatgccgccggtgagtgcgcctgcgcctcggtccacggggccaatcgcctgggc
ggcaactcgctcctggacatcctggtattcggacgtctggccggcaaggacatcatcgag
tatgtgcgcgccaacccccaccggcgtgagaccgacccggtcagcctggagcaggccatg
gcccgcctcacccgctgggagcgcaagggcgagggggtgccggcgcatcaactgcgggcc
gaattccgcaaatgcatggaggaccacgcgggggtcttccggaccgaggaggtcatggcc
gagggctaccagaagctcagcgaattgcgcgagcgcttcaaagatgcccggctcggggac
caatccaaggtcttcaacaccgcccgtatcgaggccttggaactggaaaacctgatcgac
gtggggctcgccgtcgcggtgtccgccctgcaccgcaaggagagccgcggcgcccactcg
cggcccgattaccccaagcgtgatgacgtcaactggatgaagcacagcctgtactatcgc
gacggtgaccgcatggactacaagcgggtgcgcacgaagccgctgacggtcgagtcgttc
ccgccggcggagcggacctactag
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