Candidatus Thiodictyon syntrophicum: THSYN_08265
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Entry
THSYN_08265 CDS
T05211
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy00550
Peptidoglycan biosynthesis
tsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THSYN_08265
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsy01003
]
THSYN_08265
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsy01011
]
THSYN_08265
Enzymes [BR:
tsy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
THSYN_08265
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
THSYN_08265
Glycosyltransferases [BR:
tsy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
THSYN_08265
Peptidoglycan biosynthesis and degradation proteins [BR:
tsy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
THSYN_08265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AUB80940
UniProt:
A0A2K8U5T5
LinkDB
All DBs
Position
1951919..1954357
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AA seq
812 aa
AA seq
DB search
MPNTYSSDHSGRHPPPRPRRRISGFLLRWALLVGVAVGLAGALYGVHLDRVVRAKFEGKR
WALPARVFARPLEIYVDRPLTPEQLDAELARLNYRQVTDPTADGTYSRDGGRFVVHTRSF
RFWDGEEPGRLLELDLKDAKVAALRDAGDGSAPALVRLEAALIASIYPTHNEDRVLVKRK
DLPDLLVRTLLAVEDRSFFSHSGIDPRGIIRAGYHNLRAGSVVEGASTLTQQLVKNFYLT
ADRTMTRKLNEAYMALLLEWRYNKDDILEAYANEIYLGQDGSRGIHGFGLASSFFFNRDL
DELGIAEAALLVGLVQAPSSLDPRRFAEAALKRRNLVIDVMVRDGVIGAADGDLAKSAPL
GLRDGGGRPTGEYPDYIQLVRRQLQRDYRDEDLRSEGLRVFTTLDPLIQSAVEAALPKRL
RELEKSHGMRVGTLETAAVVTSVTNGEVLALAGGRQAGYAGFNRALDTVRSIGSLVKPAV
YLAALSNPKRYTLTTNIPDQPYSLRIGGDLWSPQNYDHSVHGSVPLYQALAHSWNLATVN
LGMSIGVKEVAETLYRLGAQRRIVAVPAMMLGSVSLSPLEVAQIYQTIGAGGYRAPLRAI
REVMDVNGRPLNRYPLAVEAVVDPRAAYLTGWAMQQVVRQGTAKWLGNRLPSGLTMAGKT
GTTDDGRDSWFAGFSGDKVAVVWMGRDDYKPTGFAGGTGALRVWAEFMLAIPNEPLTQSP
PEGVVLSGACGQSGIPYIVGSGPAGGGCADKADTRSAAKRSDAPKGRADEPPQAPAAARP
AAVPAPTSAPKPKPQPQPKPQPPTENLFLSNS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacacttattcttccgatcattccgggcgccatccgcccccgcgtccgcgccgc
cgcatcagcggatttctgctgcggtgggccttgctggtcggcgtcgccgtcggcctggcg
ggtgccctctacggtgtccatctcgaccgggtggtgcgcgcgaaattcgagggcaaacgc
tgggccttgccggcccgggtgttcgcgcgcccgctggagatctacgtcgatcggcccttg
acacccgagcagctggacgctgaactcgcgcggctgaattatcggcaggtgaccgacccg
acggccgatgggacctacagccgggacggcgggcgcttcgtggtgcacacccgcagtttt
cgtttttgggacggcgaggagccgggacgcttgctggaactggatcttaaggatgccaag
gtggcggccctgcgtgatgcaggcgacgggtccgcgccggccctggtgcgactcgaggct
gcgctgatcgcgagcatttacccgacccacaacgaggaccgggtgttggtgaagcgcaag
gacctgccggacctgctggtaagaaccctgctggccgtcgaggatcggagcttcttcagc
cacagcgggatcgatccgcgcggaatcatccgtgccggctatcacaacctccgtgccggt
agtgtcgtggagggcgccagtaccctgacccagcaactggtcaagaacttctatctgact
gccgatcgcacgatgacgcgcaagctcaacgaggcctatatggccctgctgctggagtgg
cgttacaacaaggacgacatcctggaggcctacgccaacgaaatctacttgggccaggac
ggtagccgcggcatccacggatttggccttgcgagcagcttcttctttaaccgcgacctc
gacgagctgggcattgcggaggccgcgctgctggtcggtctggtgcaggccccctccagt
ctggatccacggcggtttgcggaggcggcgctgaagcggcgcaacctggtgatcgacgtg
atggtgcgcgacggggtcatcggcgccgccgacggtgacctggccaagtccgcgccgctc
gggctgcgcgacgggggcgggcggccgaccggcgagtaccccgactatatccaactggtg
cgccgccaactgcaacgtgactatcgcgacgaggacctgcgctccgagggtctgcgcgtc
ttcaccacgctcgacccgctgattcagtctgcggtggaggccgcgctgccgaaacggctg
cgcgaattggagaagtcacacgggatgcgcgtcggcaccctggagaccgcggcggtcgtc
acctcggtcaccaacggtgaggtgctggccctggcgggcgggcgccaggcgggctacgcg
gggttcaatcgcgccctggacaccgtacgctcgatcggctccctggtgaagccggcggtc
tatctggcggccctgtccaatcccaagcgctatacgctgacgaccaacatcccggatcag
ccttacagtttgcggatcgggggtgatctctggtcgcctcagaactacgatcactcggtc
cacggctccgtgccgctgtatcaggcccttgcgcattcctggaatttggcgaccgtcaat
ctggggatgagtatcggggtcaaggaggtggccgaaacactctatcgcctgggtgcccaa
cggcggattgtcgcggtaccggccatgatgttggggtccgtctccctgtcacccttggag
gtggcccagatctaccagacgattggcgcgggcggttaccgcgcccccctgcgcgcgatc
cgcgaggtgatggacgtgaacggtcgcccgctcaaccgctatcccctggcggtggaggcg
gtggtcgacccgcgggcggcctatctgaccggctgggcgatgcagcaggtggtccgccag
ggaaccgccaagtggctcggcaatcgcctgcccagcggcctgaccatggccggcaagacc
ggtacgaccgacgacgggcgcgacagttggtttgccggtttcagcggcgataaggtcgcc
gtcgtgtggatggggcgtgatgactacaagcccacggggtttgccggcggtaccggggcg
ctgcgcgtctgggccgagttcatgctggcgatcccgaacgagccactcacgcagtcgccc
ccggagggcgtcgtgctgtcgggtgcctgcggccaatccggcataccctatatcgtgggt
agtgggccggcgggcggcgggtgtgcggacaaggcggacacccggtccgccgcgaaacgc
tcggatgcgcccaaaggccgtgccgatgagccgccgcaagcgcccgcggcggcccgtccc
gcggcggtccccgcgccgacctccgctcccaagccgaagccgcagccgcagccgaagccg
cagccaccgactgaaaatctcttcttgagcaattcgtag
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