Candidatus Thiodictyon syntrophicum: THSYN_08315
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Entry
THSYN_08315 CDS
T05211
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsy02000
]
THSYN_08315
Transporters [BR:
tsy02000
]
Other transporters
Pores ion channels [TC:
1
]
THSYN_08315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
SdrD_B
CarboxypepD_reg
bMG10
bMG3
SpaA
DUF6742
NOMO_3rd
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
AUB80950
UniProt:
A0A2K8U5U5
LinkDB
All DBs
Position
1965033..1969901
Genome browser
AA seq
1622 aa
AA seq
DB search
MTKANKRNWLARLPSVADLGGGGAFHWPPMRYFSIFLLLLTTTIGWTSEALATATINKQF
TPATIDPGNISRFRITVVNASLVPLTAAAVTDNLPANIKISSPTNATDTCGFTSVTATPG
ASQIILNGGTIPAGTGTVDGLCYYELDVVSTVAGNWINTIPKNGPSNGFTPGGTTSGFQA
TENTVVITNTTDAVATLSVRGLSPPTGSKTFAPSPGLVGEPVTLTIVLTNPASNGTTMPL
TTFTDTLPVGMVVAPAPTSSVVCTGTGAVNGAFSPNAGDTSLILTGGTIGGASGSGGTCT
LSVKVVVNSIGTNTTQTFTNSLAAGAIGNTRGLTSPVFSRNEVINSPIGLAKSFLTTTVG
VGQNSVMRIDITNASTANTLTVTSLTDSLPTGLTVGNLTTNPPTIDCVTSGGGTNGTFSP
ALTQGDASITIVNAVVGKTGGTRRCRIQVPVQAAASGSYVNTIAANAVINPGSLASPAAT
ATLTVNGALTVAKSSSPTSVAAGQPTTFTVTINNWSATPVSGVNFTDTLPLSDTGGFQMV
LANPVNRTASVGCSGGTWTETPGASSLTWTGGTIAGGNPGVCTITFRAIPPIDTTIGRTF
NNSIPVNSICSGSICNTNAVSSGNVTVIAGASVTKAFSPTSVAQGQTSQLTVTLTNATAT
PITNAGLTDNLPTSPGNVVVAAVPGTSTTCASGTVTASAGSQSVSIAGATIPASGSCNFK
VNVTGSTVGTHTNTIPIGALTSTEGVSNPAVATANLGITTGLTGTKSFSPTSVAVNGVSR
VTVTVTNFSSGPLTGVSITDPLGANLQVASPANATTTCAGTPVLTATPGTNSASLTGADI
GIGGNCRFLFDVKAINNPTNWPNTIPVGNVTSAEGPANTAVISATLGKTATSIAINKSFD
PVIVTGGQPSVLRIDITNPIGSPSGADNVSFTDTFPTGIEVYAVPNPSTTCTNGLVTAVP
GAGSISLSGATLAANSTCSVFVTTTSVKFLNLINTIPVAAVSTTQGYTNSLATTATLSTL
QGLGAAKSFTPTSISAGQTATLKIRLFSTRDPSQPNTTLTGVSFTDSLPAGLTVAPTPNA
STDCGGGTVTAAANATQVTLAGATIQPNTNCLVQVDVTASALGAYTNTIPKDTVTSNEGF
KSPNDAVATLNVLNPPVITKAFSPAPVKAGQVSTLTVTITNANAQTLNGVALTDNLPSGL
SVASAPNASTTCSGGAVAALVAGSSIALTNATVPASGACTFQADVASNVPGDYLNTIPAN
ALVTTQGVTNTAPATNTLTVLQPPTVAKSFSPTTIDVGATSLLTLTLGNSNASAITLASV
LTDTLPGTLKVASPNGLSGTCTLASVTAAPGGNTIQYANGASIPSGGCTIAVLVTGAQAG
SYPNVIPASALDTSAGANQSPATATLDLQAVAIGNRVWFDDGAGGGTANDGIQNGSEAGV
SGVTVLLFDNSDTQVRSTTTDANGYYFFDNLAPGSYYVKIPASAFGAGQPLQGYLSSTGA
DSGTVTDLNDNGIDNAAPTTNGIRSNTFALAVGTMPTGEDQTGYTGTLLDNSVNATNDFG
FVAANTLVAIGNRVWIDNGAGTGGVANDGIQNGAEAGVSGVNVVLFDSSNAQVGTTTTDA
GG
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcgaacaagagaaattggctggcgcgcctgccgtcggtggcagacctcggc
ggcggtggggctttccactggcctccgatgcggtatttctcaatcttcctgctcttgctg
acgactaccatcggctggacctcggaggccctggcgactgccaccatcaacaagcagttc
acgcccgcgaccatcgacccgggcaatatcagccgctttcgtattacggtcgtcaacgcc
tccctggttccgctgaccgccgccgcggtgacggataacctgccggcgaacatcaagatc
tccagcccgacgaacgcaaccgatacctgcggcttcaccagtgtcaccgccaccccgggc
gcctcccagatcatcctgaacggcggtaccatacccgccggcacgggtacggtggatggc
ctgtgctactacgagctggacgtggtctccaccgtcgccggcaactggatcaataccatc
cccaagaacgggccgagcaacggtttcaccccgggcgggacgaccagcggctttcaggcc
actgagaatacggtggtcattaccaacaccactgacgcggttgccacgctctcggtgcgc
ggtctgagcccgccgaccgggtccaagaccttcgcgccctcgccggggctggttggggag
ccggtcacgctgaccatcgtgttgacgaatccggcctccaacggcaccacgatgccgctg
accactttcaccgatacactccctgttggcatggtggtggcaccggcgcccacgtcaagt
gtcgtttgtaccgggacgggggctgtgaatggggccttctcgcccaacgccggggatacg
tccctgatcctgaccggcggcaccatcggtggcgcgagcggcagcggcggaacctgcacc
ctgtcggtgaaggtggtggtcaattcgattggcaccaacaccacgcagaccttcaccaac
tcgctggccgccggggccatcggcaatacccgcggtctgaccagtccggtgttctccagg
aacgaagtcatcaactccccgatcgggttggccaagagctttctcaccaccacggtcggg
gtgggccagaacagcgtcatgcgcattgacattaccaatgccagcactgccaatacgctt
acggttactagtctcaccgactcgctgccgaccggcttaacggtcggcaacctgacgaca
aaccctccgacgatcgactgtgttaccagcggcggcggcaccaacggcaccttcagcccg
gccctgactcagggggacgcgtccattaccatcgtcaacgccgtggtcggcaagacaggg
ggtaccaggcgctgccgcatccaggtcccggtgcaagccgctgcgtccggcagttacgtc
aataccattgcggccaacgcagtcattaacccgggcagtctggccagtcccgcggcgacc
gcgacgctgacggtcaacggcgccctgaccgtcgccaagagcagcagcccgacatcggtg
gcggccggacagccgaccaccttcaccgtcaccatcaacaactggtcggcgacgccggtg
tccggggtcaatttcaccgacaccttgccgctgtcggacaccggtggattccagatggtc
ctggccaacccggtcaaccggaccgcgagcgtgggctgtagcggcgggacctggactgaa
acccccggcgcctcgtccctcacctggacgggagggaccatcgccggaggcaaccccgga
gtctgcaccatcaccttccgcgccatcccgccaatcgataccacaatcggaaggaccttc
aacaactcgattcctgtcaattctatttgcagcggatcgatctgcaataccaatgccgtt
agttcggggaacgtgaccgtcatcgcgggggcctcagtcaccaaggcgtttagccccacg
tccgtggcccagggccagacctcgcaattgacggtgaccctgaccaatgcgacggcgacg
cccatcaccaatgccgggctgaccgacaacctgccgacatcgcccggcaatgtcgtcgtt
gcggcggtcccgggtactagcacgacctgcgccagcggtaccgtgacggcgagcgccggc
agccaaagtgtcagcattgctggtgccaccattcccgccagcggcagttgcaacttcaag
gtcaacgtgaccggcagtacggtcggcactcacaccaataccattccgatcggggcactg
accagtaccgagggcgtgtccaatccggctgtggccacggcgaatctgggcattaccacc
gggctcaccggtaccaagtcgttctccccgacctcggtcgccgttaatggggtctcgcgg
gtcacggtcaccgtgaccaacttttcatcggggccattgaccggcgtgtccatcacggac
cccttgggcgcgaacttgcaggtcgcttccccggccaatgccaccaccacctgcgcgggt
acgccggtcctgaccgccacccccggcacgaacagcgcatcccttaccggtgcggacatc
ggcatcggcggtaactgtcggttcctgttcgatgtcaaggcgatcaataatccgacgaat
tggcccaacacgatcccggtgggcaatgttaccagcgcagagggaccggccaacacggct
gtcattagcgccaccctgggcaagaccgccaccagcatcgcgataaataagtcatttgac
ccggtgatcgtcaccggcggtcagccctccgtgttgcggatcgatattaccaacccgatc
ggctccccctccggcgcggataacgtgagcttcaccgataccttcccgaccggtatcgag
gtctatgcggtgccaaacccgagcactacctgcaccaatggcttggtcaccgcggtaccg
ggcgccggttccatcagcctgtccggtgccacgctcgcggccaattcgacctgctcggtc
tttgtgaccacgacctcggtgaagttcctgaacctgatcaacaccattcccgtggctgcg
gtcagcacgacccagggctacaccaatagcctggcgaccaccgcgacactgtccaccctc
cagggattgggcgcagccaaaagcttcacgcccaccagtatctcggcggggcagacggcg
accctgaagatccgcctgttcagcactcgcgacccgagccagccgaacacgaccttgact
ggcgtgagctttaccgacagcctgccggccggactgaccgtggcgccgacccccaatgcc
tctaccgactgcggcggcgggactgtgaccgcggccgctaatgccacccaggtgactctg
gccggcgcgaccatccaacccaataccaactgcctggtgcaggtcgacgtgacggcgtcg
gcgcttggcgcctataccaataccatccccaaggacacagtcacctccaacgagggcttc
aagagtccgaacgatgcggttgcgaccttgaacgtcctgaacccgccggtcatcaccaag
gcattcagcccggcaccggtcaaggcgggtcaggtctccacactgacggtcaccattacc
aatgcgaacgcccagaccctgaacggggtggccctgaccgacaacctgccgtcgggcctg
tcggtcgccagcgcacccaatgcctcgacgacctgttctggcggcgctgtggcagccctg
gtggcgggtagcagcattgcgctgaccaacgcgacggtgccggccagcggggcttgcaca
ttccaggcggatgtggcgagtaacgtgccgggtgactacctgaacaccattccggccaac
gcgctggtgacgacgcaaggggtcacaaacacagcacccgcgacaaataccctgaccgtg
ctgcagccacccacggtcgcgaagtccttcagccccacgaccatcgacgtgggcgcgacc
tccctcttgaccctgaccctgggcaacagcaatgccagcgccattaccctggcctcggtc
ctgaccgacaccctgcccggcacgctcaaggtggccagccccaacggcctgtccgggacc
tgtaccctggccagcgtcacggcggcgcccggtggcaacaccatccaatacgccaacggg
gccagcatcccgtccggcggctgcaccattgcggtgttggttaccggcgcccaggccggc
agctatccgaacgtgatccccgccagcgcgctcgacaccagtgcgggggccaaccagtct
ccggcaacggcgacgctggacctccaggcggtggcaatcggcaaccgggtctggttcgac
gatggcgccggcggtgggaccgccaacgatggtatccagaacggcagcgaggcgggagtc
tccggcgtcacggtcctgctcttcgacaacagtgacacccaggtccgcagcaccaccacc
gacgccaacggctactacttcttcgacaacctggccccgggcagttattacgtcaagatc
ccggccagcgcgttcggcgcaggccagccgctgcaaggctatctcagcagcacgggtgcc
gacagcggtacggtcacggacctcaatgataacggcatcgacaacgccgcgccgaccacc
aacggcattcgcagcaatacctttgccctggcggtggggaccatgcccacgggtgaggac
cagaccggctatacgggcacgctcttggacaacagtgtcaacgccaccaacgacttcggc
ttcgttgccgctaacaccctggtcgccatcggcaaccgcgtgtggatcgacaacggtgcg
ggcactggcggggtggcgaacgacggcatccagaacggcgccgaggcgggtgtctccggc
gtcaatgtcgtgctcttcgacagtagcaacgcccaggtcggcactaccaccaccgatgcc
ggtggctag
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