Candidatus Thiodictyon syntrophicum: THSYN_09345
Help
Entry
THSYN_09345 CDS
T05211
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsy03016
]
THSYN_09345
Enzymes [BR:
tsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THSYN_09345
Transfer RNA biogenesis [BR:
tsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THSYN_09345
Prokaryotic type
THSYN_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AUB84706
UniProt:
A0A2K8UGJ8
LinkDB
All DBs
Position
complement(2202358..2203281)
Genome browser
AA seq
307 aa
AA seq
DB search
MGGKRRNPGRDVTGILLLDKPLGLTSNDALQRIKRLYRAAKAGHTGSLDPLATGLLPVCL
GAATKFSAFLLDADKRYRVRVRLGVTTTTADAEGEVVETKPVVGVDEARVRAVLEQFLGL
IDQLPPMYSAIKQGGERLYKLARQGVEVERAKRPIHIFSLDLLACEWPEIELDVHCSKGT
YVRTLAEDIGRELGCGGHVSRLRRTGVGPYAENVVEFITLDQVRDLADQEGAAARLDALL
LPLDSALGHWPAVRLSADAAFYLQQGQAVLVPQAPTEGLVRLYDVSKHFLGVGEIQDDGK
VQPKRLV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaaacggcgcaatccaggacgtgacgtcaccggtatcctgctgttggacaag
ccgctcgggctcacctccaacgacgccttgcagcgtatcaaacgcctgtatcgggccgcc
aaggctgggcatacgggcagcctggaccccctggcgaccgggctcctgccggtgtgtctg
ggggcggccaccaagttctccgccttcctgctggacgcggataagcgttatcgggtgcgg
gtacgactcggtgtcaccaccaccacggccgatgccgagggcgaggtggtagagaccaag
cccgtggtgggggtcgacgaggcccgggtgcgcgcggttctggagcagttcttaggcctg
atcgaccagctcccgccgatgtattcggcaattaagcaggggggcgagcggctctacaaa
ctggcccgccagggcgtggaggtcgagcgcgccaagcgccccatccatatcttctccctt
gatctgctcgcctgcgagtggccggagatcgagctcgacgtgcactgctccaagggcacc
tatgtccgtaccctagccgaggatatcggccgtgaactcggctgcggcggccatgtgagc
cggttgcgccgtaccggggtcgggccctacgcggagaacgtggtcgagttcatcaccctg
gatcaggtgcgtgacctggcggaccaggagggcgcggcggcgcggctcgacgccctgctt
ctcccgctcgactcggcgctcggccattggccggcggtgcgcctctccgccgatgccgcc
ttctatctccagcagggccaggccgtgctggtgccccaggccccgaccgagggcctggtg
cggctctacgacgtctccaagcacttcctgggcgtcggcgagatccaggacgacgggaag
gtgcagccgaaacgtttggtataa
DBGET
integrated database retrieval system
