Candidatus Thiodictyon syntrophicum: THSYN_10590
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Entry
THSYN_10590 CDS
T05211
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THSYN_10590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_10590
Enzymes [BR:
tsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
THSYN_10590
DNA repair and recombination proteins [BR:
tsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THSYN_10590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUB81354
UniProt:
A0A2K8U722
LinkDB
All DBs
Position
2542853..2546299
Genome browser
AA seq
1148 aa
AA seq
DB search
MVGLFDYDNDNDNDNVPAISVTTSVLIAPRGRLPEDSRNGSPCGDNGPRVAALVATRSAH
PMLEIYHSNRLEVLLDHLVAVLDRPPADPFGEEFLVAQNQGMARWLAQGLAQRTGIAANL
RFPLPARLVWDLLGCWFADLPPQSDWDKDRLVWRIFAWLPQLVADPAFAEPARYLVGEPR
ELKTYQLARRVADLFDQYLVYRPELVLEWEQGASLKPDQDHWQSRLWRLLAAQIQTPHRA
ALFARLDRALTEGVAPRTPLPERVLVFAPTALPPIYCRVLVGLAGLIPVHLFVLNPCDQY
WADIVDEGRQARGRARALVTGTPDSTALLDLGNPLLASWGHGGMGFQDQLIEMGGDEIPD
FREPDQGCLLGLIQGDILALRDRRSPDPAHRTPLDPTDDSIQVQACHGRHREVQVLHDRL
LRCFATLPGLKPRQIICMAPDIDSYAPHIDAVFGAAPAVRRIPWSIADRRLSAEQPLLGA
VTELLGLPNSRLGAAQVLDWLEVPAIARRFAIEPADLARIRTWVTETGVRWGLDAAMRAD
LDLPGEDANSWACGLRRLFLGLALPPGDTLYRGVLPYPDLEGAEALALGGLQELIETLGH
WRLALARPRTLADWAGAVNRLLADLFEPDEDEEDLLQPLRAALDQLGRNGAAAGLTAPVG
LDILRAEVGAVLDAATPAQRFLTGRVTFCNMVPMRSIPARVLCLLGMNGIDFPRDQRPLS
FDLMAAAPRRGDRARREDDRHLFLEAVLSARERLYLSYLGRDQRDNAVRVPSVLVDELLD
YCRGAFRFTDGVDLLERLLVRHPLQPFSRRYFDGADPRLWSYRDDWCRAAQAGRTPGSDC
FAPLTAAPDAARETDAPVPELELDDLIRFLRLPAEWFLTRGLGLRTPQDEAAVAEVEPFV
LDGLTGWGLRQRLLALAGEGRPDSEARALVLAGGDLPHGAAAELLLDAQAGRVAAFRDGL
APYLRDLRPPLDLGLAIGGLRLVGWVDGVTGGGRVAWRLGRQRAQDLVALWVRHLVLNHL
APAGVEPRSTLITESQDQRTGAFGLAVLTLEPVQGALGHLEHLLALFQFGQSAPLPLYPE
TSCAFARSGWDKKTWDAWEGGFGGGSGESQNWAVRTALRGRDPIDQTFEALAHQVFDPLF
AAIQDDGD
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggattattcgattacgacaacgacaacgacaacgacaacgtacccgcgatctcg
gtcactacatcagttctgatcgcaccccgcggccggttgcctgaggactcgcgcaatggg
tccccctgcggtgacaatggcccccgcgtcgccgcccttgtcgccaccaggtccgcccac
cccatgcttgagatctaccacagcaaccgcctcgaggtcctgctggaccacctggtcgcg
gtgctcgaccggccgcccgcggaccccttcggcgaggagtttctggtcgcccagaaccag
gggatggcgcgctggctggcgcaggggctggcgcagcggaccgggatcgcggccaatctg
cgctttccgctgccggcgcgcctcgtctgggacctgctcgggtgctggttcgcggacctg
ccgccccaatcggactgggacaaggaccgcctggtgtggcggatcttcgcctggctgccg
caactggtcgcggaccccgcctttgccgagcccgcccgctacctggtcggcgagccgcgg
gagctcaagacctaccagttggcgcggcgggtggcggacctcttcgaccaatacctggtc
tatcgccccgaactggtccttgaatgggagcagggggctagcctcaagcccgaccaggac
cactggcagtcccgcctctggcgcctgctggccgcgcagatccagacgccccaccgcgcc
gccctgttcgcccgcctggaccgcgccctgaccgagggcgttgcgccccgcacgcccctg
ccggagcgcgtcctggtgttcgcccccaccgcgctcccgcccatctattgccgggtcctg
gtggggctcgccgggctgatcccggtccatctgttcgtgctgaacccctgtgaccagtat
tgggccgatatcgtcgatgaggggcggcaggcgcgcgggcgcgcccgcgccctggtcacc
gggaccccggacagcaccgcgctcctggatctcggcaacccgctgctcgcctcctggggc
cacgggggcatgggcttccaggaccaactgatcgagatgggcggggacgagatcccggac
ttccgggagccggaccagggctgcctgctcggcctgatccagggcgacatcctggccctg
cgcgaccggcgcagcccggacccggcgcaccgcaccccgctcgacccgacggacgactcg
atccaggtccaggcgtgccacgggcgccatcgggaggtccaggtcctgcacgaccggctg
ctgcgctgcttcgcgacgctgccggggctcaagccccggcagatcatctgcatggccccg
gacatcgacagctatgccccgcacatcgacgcggtgttcggtgccgcgccggccgtgcgg
cgcatcccctggtccatcgccgaccggcgcctgtcggccgagcagccgctgctgggcgcg
gtcacggaactgctcgggctgcccaactcccgcctgggggcggcgcaggtgctggactgg
ctggaggtaccggccatcgcccggcgcttcgcgatcgagccggcggatctcgcgcgcatc
cgcacctgggtgaccgagaccggggtgcgctggggcctggacgccgccatgcgcgccgac
ctggacctgccgggcgaggacgccaactcctgggcctgcggcctgcggcgcctgttcctg
gggctggccctgccgccgggcgacaccctctaccgcggcgtcctgccctacccggacctg
gagggcgccgaggcgctggccctgggcgggctccaggagttgatcgagaccctggggcac
tggcgcctggccctggcccgcccgcgcaccctggcggactgggcgggcgccgtcaaccgc
ctgctcgccgacctgttcgagccggacgaggacgaggaggacctgctccaacccctgcgc
gccgcgctcgaccaactcgggcgcaacggcgccgcggccggcctcacggccccggtcggg
ctcgacatcctgcgcgccgaggtcggtgccgtactggacgccgccacccccgcccagcgc
ttcctgaccggccgggtcaccttctgcaacatggtcccgatgcgcagcatcccagcgcgc
gtcctgtgcctgctcggcatgaacgggatcgacttcccccgcgaccagcgccccctgagc
ttcgacctgatggccgccgccccgcgccgcggcgatcgcgcccgccgggaggacgaccgg
cacctgttcctggaggctgtgctgtccgcccgcgagcggctttatctctcctatctgggc
cgcgaccagcgcgacaacgcggtgcgggtcccctcggtgctggtcgacgaactgctcgac
tactgccgcggcgccttccgctttaccgacggggtcgacctgctggagcgtctgctggtg
cgccacccgctccagcccttctcgcggcgctatttcgacggcgccgacccgcgcctgtgg
agctaccgggacgactggtgccgcgccgcccaggccgggcgcacccccggctccgactgc
tttgccccgctcacggcggcgccggacgccgcccgggagacggacgcgcccgtgccggag
ttggaactcgatgacctgatccgcttcctgcgcctgcctgccgagtggttcctgacccgc
ggcctgggtctgcgcaccccgcaggacgaggcggccgtggccgaggtcgagcccttcgta
ctcgacggcctcaccggctggggcctgcgccagcgcctcctggccctggcgggggagggc
cggcccgacagcgaggcgcgcgccctggtgctggccggcggcgatctgccccacggcgcc
gccgccgaactgctgctggacgcgcaggccgggcgggtcgcggccttccgcgacgggctg
gcgccctatctgcgggacctgcgcccgcccctggacctggggctcgccatcggcggcctg
cggctcgtcggctgggtggatggggtcacgggcggggggcgggtcgcctggcggctcggc
cggcagcgcgcccaggacctggtcgccctgtgggtgcggcacctggtgctcaaccacctg
gcgcccgccggggtcgagccgcgcagcaccctgatcaccgagagccaggaccagcgcacc
ggcgccttcgggcttgccgtgctgaccctggagcccgtccagggcgcccttgggcacctg
gagcacctgctcgccctgttccagttcggccagtcggcccccttgcccctctaccccgag
acctcctgcgccttcgcccgctccggctgggacaaaaagacctgggacgcctgggagggc
ggcttcggcggcggctccggcgagtcgcagaattgggcggtgcgcaccgccctgcgtggg
cgcgaccccatcgaccagaccttcgaggccctggcccaccaggtcttcgaccccctgttt
gccgcgatccaggacgacggcgactga
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