Candidatus Thiodictyon syntrophicum: THSYN_11040
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Entry
THSYN_11040 CDS
T05211
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THSYN_11040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_11040
Enzymes [BR:
tsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THSYN_11040
DNA repair and recombination proteins [BR:
tsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THSYN_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AUB81436
UniProt:
A0A2K8U779
LinkDB
All DBs
Position
2652078..2654312
Genome browser
AA seq
744 aa
AA seq
DB search
MRVAVAAPLAGLFDYLPPADAHLMPLIPGVRLLVPFGRGRRVGILVETAGHSDQSPERLK
PALAVLDATPVLGPDDLRLIRWAADYYRAPLGEALFSALPARLRRPDARLGSGLPGLRAT
AAGGALALADLGRAAGQRRLLETLRAAPEGLATLHLKALLGPCAGPLKALRERGLIEPCR
VAARAAPSAPVGSPAAAALAPVAVGPVLNAEQTRAVAAVAAALGGFAPFVLDGVTGSGKT
EVYIRLIERVIASGYQALVLVPEIGLTPQLRDRLAQRLPGPHAVLHSALPEAERERAWHS
AAAGRATLVLGTRSACFVPLPRLGLIVVDEEHDASLKQQEGFRYSARDLAVRRAQQAGCP
VVLGSATPSLETLHNARAGRYRRLHLSERAGGAQAPVFALLDIRGQPMSAGLCAALRDQV
ETQTGAGNQVLLFLNRRGYAPVLTCHDCGWVGACPHCDARLTLHLRLRRLWCHHCGWFQA
TPGTCPDCRGTDLRGLGLGTERLEEELRAVFPAVNLARIDRDSTRRKGELDRLLAASRSG
EIQILLGTQMLAKGHDFPGVTLVGILDLDHSLYAADFRAPERTAQLIVQVAGRAGRAQRP
GRVVLQTRHPEHPLLRSLIKGGYPGFAELALAEREAAQLPPFAHLALLRADAPDAEVPMD
FLRQGRALALALQGELVGTRVAVSSPVPAPMERRAGRYRAQLLLEGPDRPGLQRFLGSWV
GRLWTLPRTRGLRWSLDVDPQDMM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcgcggtggcggccccgctggccggactcttcgactatctgcccccggcggac
gcgcacttgatgcccctgatccccggcgtgcgtctcctggtgcccttcgggcgcgggcgg
cgggtcggcatcctggtggagaccgccgggcactccgaccagtcgccggagcgcttgaag
cccgccctcgccgtgctggatgcgaccccggtgctcggccccgacgacttgcggctcatc
cgctgggccgccgactactatcgcgcacccctgggcgaggccctgttcagcgccctgccg
gcgcgcctgcgccgcccggacgcgcgcctcgggagcggcctcccggggctgcgcgcgacc
gccgccgggggcgccctggcgcttgccgacctggggcgggcagcgggtcagcgccgcctc
ctggagacgttgcgggcggccccggagggactggcgacgctgcatctgaaggccctgctc
ggcccctgcgccgggccgctcaaggccctgcgtgagcggggcctgatcgaaccctgccgg
gtcgcggcgcgggccgcgccgtcggcgccggtcggttccccggcggcggccgcgctcgcc
ccggtcgcggtggggccggtcctcaatgccgagcagacccgggcggtcgcggcggtcgcg
gcggccctgggcggcttcgcccccttcgtcctcgacggggtgaccggcagcggcaagacc
gaggtctatattcgcctgatcgagcgcgtgatcgcgtccgggtaccaggccctggtgctg
gtgccggagatcggtctcacaccgcaactgcgcgaccgcctggcgcagcgcctgcccgga
ccccacgcggtgctgcactcggccctgccggaggccgagcgcgagcgcgcctggcacagt
gccgccgccgggcgcgcgaccctggtgctcggcacccgctcggcctgtttcgtgcccctg
ccgcgcctggggctgatcgtcgtggacgaggagcacgacgcctccctcaagcagcaggag
gggttccgctactcggcccgggatctggcggtgcggcgcgcccagcaggccggctgtccg
gtcgtcctgggctcggccaccccgtccctggagaccctccacaacgcccgcgccgggcgt
taccggcggctgcacctgagtgagcgcgccgggggtgcgcaggcgcccgtcttcgcgctc
ctggacatccgcggccagccgatgagcgccggcctctgcgcggcgctgcgcgaccaggtc
gagacccagaccggggccggtaatcaggtcctgctgttcctcaaccgccgcggttatgcc
ccggtgctgacctgccacgactgcggctgggtgggtgcctgtccccattgcgacgcgcgc
ctcaccctgcacctgcggctgcgccgcctctggtgtcaccactgcggctggttccaggcc
acgccgggcacctgtccggactgccggggcaccgacctgcgcggcctgggcctggggacc
gagcgcctggaggaggaactgcgcgcggtctttccggcggtcaacctggcgcgcatcgat
cgcgacagtacccgccgcaagggggagttggatcggctgctcgcggcgagtcgcagcggg
gagatccagatcctgctcggcacccagatgctcgccaaggggcacgactttcccggggtg
accctggtcggcatcctcgacctcgaccattcgctctatgccgcggacttccgcgccccg
gagcgcacggcccagctcatcgttcaggtcgccgggcgcgccgggcgggcgcagcgcccc
ggccgggtcgtgctccagaccaggcaccccgagcaccccctgctgcgctccctgatcaag
ggcggttaccccggcttcgccgaactggccctggccgagcgggaggcggcccaactgccg
cccttcgcccacctcgcgctcctgcgcgccgatgccccggacgccgaggtccccatggac
tttctgcgccaggggcgcgccctggccctggccctgcagggcgaactggtcggcacccgg
gtggcggtgtcgagcccggtcccggcgcccatggagcggcgcgccggccgctatcgcgcc
caactcctgctggagggtccggaccggcccgggttgcagcgctttctcgggtcttgggtc
ggccgtctgtggacgctgccgcgcacccgggggctgcgctggtcgctcgacgtggacccc
caggacatgatgtaa
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