Candidatus Thiodictyon syntrophicum: THSYN_12715
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Entry
THSYN_12715 CDS
T05211
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03420
Nucleotide excision repair
tsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THSYN_12715
03430 Mismatch repair
THSYN_12715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_12715
Enzymes [BR:
tsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THSYN_12715
DNA repair and recombination proteins [BR:
tsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THSYN_12715
MMR (mismatch excision repair)
Other MMR factors
THSYN_12715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AUB81736
UniProt:
A0A2K8U827
LinkDB
All DBs
Position
complement(3031809..3033989)
Genome browser
AA seq
726 aa
AA seq
DB search
MDVSHILDPLNDAQREAVTAAMGTRLVLAGAGSGKTRVLVHRIAWLIQVENVPPWSLLAV
TFTNKAAREMRTRIEEMLGHPVGGMWVGTFHGLTHRFLRAHWQDAGLPQHFQILDGDDQF
RLIKRILKALELDESNWPPRQVQSFINKQKDEGLRPDHVDAAGDRYLTQMVAVYREYEAA
RTRGGLLDFADLLLCAHELLRERADILHHYRERFRHVLVDEFQDTNAIQYAWLRLLVGPN
DNLFAVGDDDQSIYGWRGARVENIQSLQRHFPGSQVVRLEQNYRSTGTILKAANALIARN
PGRLGKNLWTADGEGEPIRRYAAFNEVDEARFVVERIRKYSTEEGYRRAECAILYRTTAQ
SRLFEEALMNAQVPFRVYGGLRFFERAEVRDALAYLRLLNNPDDDGAFERVINTPTRGIG
ERTLDLLRERARGSAVSLWQAAQDLIAAGALGPRGTATLVHFVDLIRNAQAATRDLDLAE
TATHVIEAAALADFYMKAKDGKGEDRVENLGQFVETAGRFRQEVEDDEADPLGAFLSHAA
LEAGEAQADPFSDAVQLMTLHSAKGLEFPNVFLVGLEEGLFPHSMSAQDPARLEEERRLC
YVGMTRAMHRLYVTHAESRRLYGKESYPQPSRFLREVPPELMEEVRGRGVSRPAAARAPV
PAAAGVMGGGDTGGFHLGQRVTHPKFGEGVVLNSEGRGAQARIQVNFQGVGSKWLVLAYA
RLEPAG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcccacattctcgatcccttgaacgatgcccagcgcgaggcggtcaccgcc
gcgatgggtacccgcctggtgctggccggtgccggcagcggcaagacgcgcgtgctggtg
caccgcatcgcctggctgatccaggtggaaaatgtaccgccctggtcgctgctggcggtc
accttcaccaacaaggcggcgcgcgagatgcgcacccgcattgaggagatgctgggccac
ccggtgggcggcatgtgggtgggcacctttcacgggctcacccaccgtttcctgcgcgcc
cactggcaggacgcgggcctgccccagcacttccagatcctggacggcgacgaccagttc
cggctgatcaagcgcatcctgaaggccctggaactggacgagtccaactggccgccccgc
caggtccagagtttcatcaacaagcagaaggacgaggggctgcgcccggaccatgtggac
gcggccggtgatcgctatctaacacagatggtcgccgtctaccgggagtacgaggcggcg
cgcacgcgcggcgggctcctggacttcgcggatctgctgctgtgcgcccacgaactcctg
cgcgagcgcgcggacatcctccatcactaccgggagcgcttccgccacgtcctggtggac
gagttccaggacaccaacgccatccagtacgcctggttgcggctcctggtcggccccaac
gacaacctgttcgcggtcggcgacgacgaccagtcgatctacggctggcgcggggcgcgg
gtggagaatatccagtccctgcagcggcactttcccggcagccaggtggtccgcctcgag
cagaactaccgctccaccggcaccatcctcaaggccgccaatgcactgatcgcccgcaac
ccgggccggctcggcaagaatctgtggacggcggacggcgagggtgagccgatccgccgc
tatgccgccttcaacgaggtggacgaggcgcgcttcgtggtcgagcgcatccgcaagtac
agcaccgaggagggctaccggcgcgccgagtgcgccatcctctaccgcaccaccgcccag
tcgcgactgttcgaggaggccctgatgaacgcccaggtccccttccgggtctacggcgga
ctgcgcttcttcgagcgcgcggaggtgcgcgacgcgctcgcctatctgcgcctgctgaac
aacccggacgacgacggcgccttcgagcgcgtcatcaacacccctacgcgcggcatcggg
gagcggaccctggatctgctgcgcgagcgggcgcgcggctcggcggtctcactgtggcag
gcggcgcaggacctgatcgccgcgggcgccctgggcccccgcggcaccgccaccctggtc
cacttcgtcgacctgatccgcaacgcccaagcggcgacccgggacctggacctggccgaa
accgccacccatgtgatcgaggccgcggcccttgcggacttctatatgaaggcgaaggac
ggcaagggcgaggaccgggtcgagaacctgggccagttcgtggagaccgccgggcgcttc
cgccaggaggtcgaggacgacgaggccgacccgctcggtgcctttctgtcacatgccgcc
ctggaggcgggcgaggcccaggccgatccattcagcgacgccgtccaactcatgaccctg
cacagtgccaagggcctggagttccccaacgtcttcctggtcggtctggaggaagggctc
ttcccccacagcatgtcggcgcaggacccggcgcggctggaagaagagcgccgactctgc
tatgtcggcatgacccgcgccatgcaccggctctatgtgacgcacgccgaatcgcggcgg
ctctatggcaaggagtcctacccgcaaccctcgcgcttcctgcgcgaggtcccgccggaa
ttgatggaggaggtgcgcgggcgcggggtctcccgcccggcggcggcccgcgcgccagtg
cccgccgcggccggggtcatggggggcggcgataccggcggcttccaccttggtcagcgg
gtcacgcaccccaagttcggggagggcgtggtgctcaatagcgaggggcgcggggctcag
gcgcggatccaggtcaacttccagggggtcggctcgaaatggctggtgctcgcttatgcg
cgactggaacctgcggggtag
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