Candidatus Thiodictyon syntrophicum: THSYN_12785
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Entry
THSYN_12785 CDS
T05211
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy00330
Arginine and proline metabolism
tsy01100
Metabolic pathways
tsy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
THSYN_12785
Enzymes [BR:
tsy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
THSYN_12785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AUB81750
UniProt:
A0A2K8U835
LinkDB
All DBs
Position
complement(3046205..3048442)
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AA seq
745 aa
AA seq
DB search
MRFRFPVVIVDEDFRSENASGTGVRVLAKAIEEEGIEALGVTSFGDVASFAQQQSRASAF
ILSIDDEQFSSPEEAEKAVAQLRAFVEEIRFRNTDIPIFLYGETRTSRHIPNDVLRELHG
FIHMFEDTPEFVARYIAREARNYLDSLAPPFFRALIHYAADSSYSWHCPGHSGGVAFLKS
PVGQMFHQFFGENLLRADVCNAVEELGQLLDHTGPVVAAERNAARIFHADHLFFVTNGTS
TSNKIVWQSSVAPGDVVVVDRNCHKSILHAITITGAIPVFLMPTRNHYGIIGPIPLSEFS
WENIERKIAANPFAETGARPRILTITQSTYDGVLYNVETIKEMLDGHIGRLHFDEAWLPH
APFHDFYRNYHAIGEGRAPCADSMIFSTQSTHKMLAGLSQASQILVQESDSRKLDRDVFN
EAFLMHMSTSPQYAIIASCDVAAAMMEPPGGPALVEESILEALDFRRAMRKVDAELEESW
WFKVWGPDELAEEGIGEREDWVLRADERWHGFGELAPGFNMLDPIKATVITPGVDVDGDV
ADWGIPAAIVTRYLVEHGIIVEKTGLYSFFIMFTIGITKGRWNTMVTELQQFKDDYDHNR
PLWRIMPDFVARQPRYERIGLKDLCDQIHAVYQEHDIPRLTTEMYLSEMAPAMRPADAFA
RMAHREIDRVEIDHLEGRITAILLTPYPPGIPLLIPGERFNATIVRYLKFARAFNDKFPG
FETDIHGLVKEGLNGHVRYYVDCVR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcgtttccccgtggtcatcgtcgacgaggacttccgctccgagaacgccagc
ggcaccggcgtgcgggtgctcgccaaggcgatcgaggaggagggcatcgaggccctgggc
gtcaccagcttcggcgacgtcgcctccttcgcccagcagcagtcccgcgcctcggccttt
atcctgtcgatcgacgacgagcagttctcctccccggaggaagcggagaaggcggtcgcc
cagttgcgcgccttcgtggaggagatccgcttccgcaacaccgacatcccgatcttcctc
tacggcgagacccgcacctcgcggcacatccccaacgatgtcctgcgcgaactgcacggc
ttcatccacatgttcgaggacaccccggagttcgtcgcccgctacatcgcgcgcgaggcg
cgcaactacctggactcgctggccccgcccttcttccgcgccctgatccactacgcggcg
gacagttcctactcctggcactgcccggggcattccggcggtgtcgccttcctcaagagc
ccggtaggccagatgttccaccagttcttcggcgagaacctgctgcgcgccgacgtctgc
aacgcggtggaggagcttggacaactgctcgaccacacggggccggtggtggcggcggag
cgcaacgccgcgcgcatcttccatgccgaccacctgttcttcgtcaccaacggaacctcg
acctcgaacaagatcgtctggcagtccagcgtcgcccccggggatgtggtcgtggtggac
cgcaactgccacaagtccatcctgcacgccatcaccatcaccggggccatcccggtcttt
ctgatgcccacccgcaatcactacgggattatcgggcctatcccgctctccgaattcagt
tgggagaacatcgagcgcaagatcgccgccaaccccttcgccgaaaccggcgcccgcccg
cgtatcctgaccatcacccagagcacctatgacggcgtgctctataacgtcgagaccatc
aaggagatgctcgacgggcacatcggccggctccatttcgacgaggcctggctgccccac
gcccccttccacgacttctaccgcaactatcacgccatcggcgagggccgcgccccctgc
gccgattccatgatcttctccacccagtccacccataagatgctggcggggctctcgcag
gcatcgcaaatcctggtccaggagagcgacagccgcaaactcgaccgcgacgtgttcaac
gaggccttcctcatgcacatgtccaccagcccccaatacgccatcatcgcctcctgcgac
gtggccgccgccatgatggagccccccggcggccccgccctggtcgaggaatccatcctg
gaggcactcgacttccgccgcgccatgcgcaaggtcgacgcggagctggaagagtcctgg
tggttcaaggtctgggggccggacgaactggccgaggaaggcatcggcgagcgcgaggac
tgggtcctgcgggccgacgagcgctggcacggcttcggggagctcgcccccggcttcaat
atgctcgaccccatcaaggcgacggtgatcacccccggggtcgatgtggacggcgatgtg
gcggactggggcatcccggccgccatcgtcacccgctacctggtcgagcacggcatcatc
gtggagaagacggggctgtattcattcttcatcatgttcaccatcggcatcaccaagggc
cgctggaacaccatggtcacggagcttcagcaattcaaggacgactatgaccacaaccgc
cccctgtggcgcatcatgcccgacttcgtcgcccgccagccgcgctatgagcgcattggc
ctcaaggacctgtgcgaccagatccatgccgtctatcaggaacacgacatcccgcgcctc
accaccgagatgtatctctccgagatggcccccgccatgcgcccggccgacgccttcgcg
cgcatggcccaccgcgagatcgaccgggtcgagatcgaccacctcgaaggccgtatcacc
gccatcctgctgaccccctacccgcccggcatcccgctgctgatccccggcgagcgcttc
aatgccaccatcgtgcggtatctcaagttcgcgcgcgccttcaacgacaagttcccggga
ttcgagaccgacatccatgggttggtcaaggagggactcaatgggcatgtgcgctattat
gtggattgtgtgcggtga
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