Candidatus Thiodictyon syntrophicum: THSYN_13620
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Entry
THSYN_13620 CDS
T05211
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THSYN_13620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_13620
Enzymes [BR:
tsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
THSYN_13620
DNA repair and recombination proteins [BR:
tsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
THSYN_13620
Prokaryotic type
THSYN_13620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUB84770
UniProt:
A0A2K8UGU1
LinkDB
All DBs
Position
complement(3258535..3259098)
Genome browser
AA seq
187 aa
AA seq
DB search
MFGPPVHGQAVSSPVMMIGQAPGTKEIEQCRPFCWTAGKTLFRWFASIGLDEARVRERVL
MSAVCRCFPGKNPKGGDRVPDRPEVANCSGWWRTEMTISRPRLIIPVGKLAIAQFADQLP
AGARLDGLVGQQWPYRCAGGATADLIPLPHPSGASTWFKMEPGKALLARGLGLIAGHPAW
RELLEDR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcccgccggtgcatgggcaggcggtgtcctcgccggtgatgatgatcggccag
gcaccgggcaccaaggagatcgaacagtgccgacccttttgctggactgcgggcaagacg
ctgtttcgctggttcgcctcgatcgggctggacgaggcgcgggtgcgcgagcgggtattg
atgagcgccgtgtgccgctgctttcccggtaagaaccccaagggcggggaccgggtgccg
gatcggcccgaggtcgcgaactgctcaggctggtggcgcactgagatgacgatcagccgg
ccgcggctcatcatcccggtcggcaagctggccatcgcccagttcgcggaccaactgccc
gcgggggcgcggctcgacggcctggtgggtcagcaatggccctatcgctgcgcgggcggg
gcgacggcggacctgatcccactgccccacccgtccggggcctccacctggttcaagatg
gagccgggcaaagcgctgctggcgcgggggctcgggctgatcgccgggcatccggcgtgg
cgggagttgttggaggaccggtaa
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integrated database retrieval system
