Candidatus Thiodictyon syntrophicum: THSYN_14005
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Entry
THSYN_14005 CDS
T05211
Name
(GenBank) alpha-amylase
Organism
tsy
Candidatus Thiodictyon syntrophicum
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM26
Bac_A_amyl_C
Motif
Other DBs
NCBI-ProteinID:
AUB81948
UniProt:
A0A2K8U8L4
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Position
3347348..3349540
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AA seq
730 aa
AA seq
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MPKKKPTPAADLVVACERPAGWAEPLRVHFWDQSPGGAGSAWPGIPMTPDPEHPGWWSYR
FPATRSVRLLFTDAAGRQTPDLTRERTGWLDAAGHWHDQRPAPGTAAPAPPPPPRPRPPV
PEQLAPVAQRTDFRAETIYFLITTRFYDGDPSNNFFCRDRIRFDGNGQAIDPHWRGDFKG
LMERLDYIRDLGFTAIWITPPVENRSGLDYHGYHPYDWTRIDPRLESPGATYQDLIDAAH
ARGLKIIQDVVVNHSCQYGIRGQVHIDHLPIKYYCPQGSAPGAVDHGPYQGSLGNYAWPN
RDDIDNPLAPDWWRERHARDPEGLEPLVDPKTGETVPKPGYNPGRFFGVDANHLDPNWYH
QEGFICGGDWESAWPLQHKHLAGDCIDLATDRQNVKDYLIGAINRYLDMGVDALRIDTVK
HVERDNLLEYVNAWKAHKPGLFVFGENLVKGYGWGDLGGGDNGPSQIRPWWYTRLGHDPR
DPTSGGDSGFSVLDFGLFSTFRDTVSKGTYGGTAQILSMDWIYGDATRLVTFLQNHDVGP
DNDFKYRFKGDQWMAAAAYNLIWTARGIPCLYYGEEIEFMKGAPQDVEGERDTLDQTGRA
YFGDHLTAEAIGATQAHPLYQHIRRLNQIRRAVPALQQAPMTQVAEWGSGMSFVRDLSDQ
GDYAVIGLAIGSDQQISVGGVRDGTYRDAVTGREVQVSGGHLSFSVRANSAGIYVLDGPG
KVGEDGAYLR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaagaagccaaccccagccgccgatctcgtcgttgcctgtgagcgccccgcg
ggttgggccgagccgctgcgcgtccacttctgggaccagtcgccgggtggggcagggagc
gcctggcccggcatccccatgaccccggacccggagcacccggggtggtggtcgtatcgc
tttccggcgacccgctcggtgcgcctgctgttcaccgacgccgcgggccgccagaccccg
gacctgacgcgcgagcgcaccggttggctggacgccgccgggcactggcacgaccagcgg
cccgcgcccggcacggcggcgcccgcaccacccccgccgccgcgcccgcgcccgccggtc
cccgaacagttggcaccggtcgcgcagcgtacggacttccgggcggagaccatctatttt
ttgatcaccacccgcttctatgacggcgacccgagcaacaactttttctgtcgcgaccgt
atccgcttcgacggcaacggccaggcgatcgatccccattggcgcggcgacttcaagggt
ctgatggagcgcctggactacatccgggacttagggttcacagccatctggatcaccccg
ccggtggaaaaccgctccgggctcgactaccacggctatcacccctacgactggacgcgc
atcgacccgcgcctggagtcccccggcgcaacctatcaggatctcatcgacgccgcccac
gcccgcgggctcaaaatcatccaggacgtggtggtcaaccactcctgccagtatggcatc
cgcggccaggtccacatcgaccacctgccgatcaaatactattgcccccagggttcggcg
ccgggcgcggtcgatcacggtccctatcagggcagcctgggcaattacgcctggcccaac
cgcgatgacatcgacaaccccctggcccccgactggtggcgggagcggcacgcccgcgac
ccggagggcctcgaacccctggtcgaccccaagaccggggaaacagttcccaaacccggc
tacaacccggggcgcttcttcggtgtcgatgccaaccacctggaccccaactggtaccac
caggagggcttcatctgcggcggcgactgggagagcgcctggccgctccagcacaagcac
ctggccggggactgcatcgatctggccacggaccggcagaatgtgaaggactatctcatc
ggcgccatcaatcggtatctcgacatgggtgtggatgcactgcgcatcgacaccgtcaag
catgtggaacgtgacaacctgctcgaatacgtcaacgcctggaaggcgcacaaaccgggg
ctcttcgtcttcggtgaaaacctggtcaaggggtacggctggggggacttgggcggcggt
gacaatggcccgagccagatccggccctggtggtacacgcgcctgggtcatgacccgcgc
gaccccacgtcgggcggtgactccggtttctccgtactcgacttcgggctcttctccacc
ttccgcgacacggtgagcaagggcacctatggcggcaccgcccagatcctctccatggat
tggatctacggcgatgcgacgcgcctggtgaccttcctgcagaaccacgacgtaggcccg
gacaacgacttcaaataccgcttcaagggcgaccaatggatggcggcggcggcctataat
ctgatctggaccgcgcgcggtattccctgcctctattatggggaggagatcgaattcatg
aagggcgccccccaggatgtcgagggcgaaagggacaccctggaccagaccgggcgcgcc
tatttcggcgaccacctgaccgcggaggccatcggcgccacccaggcccatccgctctac
cagcacatccggcgtctgaaccagatccgccgcgccgtgcccgccctgcagcaggcccct
atgacccaggtcgcggagtggggcagcggcatgagcttcgtgcgtgatctctctgaccag
ggtgactatgccgtcattggtcttgccatcggctccgatcagcagatcagcgtcggcggc
gtgcgcgacggcacctaccgtgacgccgtgaccggccgcgaggtccaggtcagcggcggg
cacctgagcttcagcgtgcgcgccaactctgccggcatctatgtcctcgacggtcccggc
aaggtgggcgaggacggcgcctatctgcggtag
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