Candidatus Thiodictyon syntrophicum: THSYN_16820 Help Entry THSYN_16820       CDS       T05211                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism tsy  Candidatus Thiodictyon syntrophicum Pathway tsy03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tsy00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     THSYN_16820  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tsy03400]     THSYN_16820 DNA repair and recombination proteins [BR:tsy03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      THSYN_16820   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       THSYN_16820 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter AAA_29 AAA_21 nSTAND1 SMC_N AAA_16 UvrA_DNA-bind AAA_25 RsgA_GTPase Viral_helicase1 ATPase nSTAND3 DnaJ_CXXCXGXG Motif Other DBs NCBI-ProteinID:  AUB82441 UniProt:  A0A2K8UBL7 LinkDB All DBs Position 4035913..4041654 Genome browser AA seq 1913 aa AA seqDB search MPSDPNQPHPHERIRLRGVRQNNLKNLDLDLPLGQLIVVTGVSGSGKSSLAFDTVYAEGQ RRYVETFSPYARQFLDRMDRPAADRIEGIPPAIAIDQTNTVRNSRSTVGTMTELADYLKL LFARAARLFCRGCGREVRRDTPESVWEQLTRDAERPRVQVCFPVAVPESLGAEEVRQMLA QQGYVRLLDGDGPALTVVQDRLRLTDEHRGRALEAIETALERGHGRLLVYPVGPGQETGA PWRFSADLHCPDCDLTYREPLPNLFSFNSPIGACETCRGFGRTIGIDWGLVVPDPGKSLI EGAIKPIQSDSYAEVQEELMGFAHRRGLPTDVPWRDLPQADRDWVIEGEGEWDAGVWFGI RRFFAWLEARAYKMHVRVLLSRYRSYETCHSCNGARLKDEALGWRLGARASRPPAGGTPA LLNLPELMALPAERCRDFFAALVLPPALDQAMDLVLTEIRSRLTYLCAVGLPYLTLDRQS RTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDLDRVLGVLRRLRDQGNSLLVV EHDPQLMRAADRIIDIGPGPGEHGGQVCFQGTPTELLAADGSLTGDYLAGRRRVAAPRAP NPPAPDGPCIRIRGARAHNLKGLDVAIPLHRLVVVTGVSGSGKSTLIGDVLYRALCQRKG HPEEAPGEFDGIDGDELIADVTLLDQSPIGRTSRSNPASFVGALDVLRKRFAALPLAKER GYTAGTFSFNAGTGRCPTCGGNGFEHLEMQFLSDVYLRCPDCDGRRYRAEVLELRLPDPA DGGAELSIADVLDLTATEALVRFADDRELARALEPLTAVGLGYLRLGQPVPTLSGGEAQR LKLAGHLCKTGRSKGRGGLGSTTQGLLFLMDEPTTGLHPADVAVLLAALRRLLDQGHSLV VIEHNLDLIAAADWLIDLGPEGGDGGGELVAVGTPADLAREPGRPARALLSHTALALRDY LEQAAAGPMTPSLGDALADGSDRGEDAAPTRIGAIAEAPPPAYLQVLPTAPPIPYPLTPN PSPLSPNPSIDILHAREHNLKDLSVAIPRGRFTVITGVSGSGKSTLAFDILFNEGQRRYL ESLNAYARQFVQPAARADVEAVRGIPPTVAIEQRVSRGGAKSTLGTQTEIHHFLRLLYVK LGTQHCPGCDLPIEPLGLEAILARILRDQGGRQVAVMAPLVVARKGLYNELAAWAARKGW FVLRVDGEPIETRTWPRLDRFREHSIDLPVGEVRVGPKTEGELRALLDVALDLGKGLVRV VQVTRGTWGPETPYSTARSCPGCGRAFPEPDPRLFSYNSKHGWCPACFGSGLAMAGFDGE QTGEEDQWLDSGTEHQGCTSCRGARLNPEALSVRFRGRSIAELSALTVTATTVALAGWEL TERESAIARDLLAEVRERLAFLAQVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGV CYVLDEPSIGLHPRDNRLLLNTLTRLRDRGNTVVVVEHDEETIRRAEHVIDLGPGAGVQG GRVVAQGTAADLIAAPDSVTGRYLARRRGHGLGEPRARRPLPGKGEWLAIRGARLHNLKG MDVRVPLRRLTCVTGVSGSGKSSLVRDVLVRSLQGLLGAADEAVRVGRRGISPQGTGSAA DSSRRDAAPTGMVHGCDGLSGWHALSRVLEVDQTPIGKTPRSCPATYVGFWDRIRKLFAA SPEARIQGWGAARFSFNTAGGRCPACEGQGVQRIEMSFLPDVRVPCEVCGGSRFDRETRE VRYLGLDIGQILALDVDRAVEVFAAHPAIRHPLTLLQEVGLGYLSLGQPSPTLSGGEAQR LKLVTELTKARPSADGTHPRPTLYVLDEPTVGLHMADVERLIAVLHRLVDAGHTVIAIEH DLDLIAAADWVIDLGPEGGEAGGQVVAEGTPEQIAAGGDLPTAAALREWLGGT NT seq 5742 nt NT seq  +upstreamnt  +downstreamnt atgccgagtgacccgaaccaaccgcatccccatgagcgcatccgcctgcgcggggtgcgc cagaacaatctcaagaacctggatctggacctgccgctcggtcagttgatcgtggtcacc ggggtctcgggctccggcaagtcgtcgctcgccttcgatacggtctacgccgagggccag cggcgctatgtggagaccttctcaccctatgcccggcagttcctggaccgcatggacagg cccgcggcggaccggatcgagggcatcccgccggccattgccatcgaccagaccaatacg gtgcgcaactcccgctcgaccgtcgggaccatgactgaactggcggattacctgaagctg ctgttcgcccgcgcggcgcggctcttctgccgaggctgtgggcgggaggtccggcgtgac acaccggagtccgtctgggaacaactgacgcgcgacgcggagcgcccgcgggtacaggtc tgcttcccagtggccgtgccggagtcgctgggtgccgaggaggtccggcagatgctcgcc caacagggctatgtgcggctcttggacggggacggtccggcgctgaccgtggtccaggac cggctgcggctcaccgacgagcaccggggccgcgccctggaggcgatcgagaccgcgctg gagcgcggccatgggcggctgctggtctatccggtcggaccggggcaggaaaccggtgcg ccctggcgcttctccgccgacctgcactgcccggactgtgacctgacctatcgggaaccc ctgcccaatctcttctccttcaactcgcccatcggtgcctgcgagacctgtcggggcttc ggccggaccatcgggatcgactgggggctggtggtcccggacccgggcaaatcgctgatc gaaggggccatcaagcctatccagtcggacagctatgcggaagtccaagaggagctgatg ggctttgcccaccgccgcggcctcccgaccgacgtgccctggcgcgacctaccccaggcg gaccgagactgggtgatcgagggcgagggcgagtgggacgccggggtctggttcggcatc cgccgctttttcgcctggctggaggcgcgcgcgtacaagatgcatgtgcgggtgctgctg tcgcgctaccggtcctatgagacctgtcacagttgcaatggggccaggctgaaggacgag gccctggggtggcgcctgggagcgcgggcgtcccgcccgcccgcgggcgggacgcccgcg ctcctcaacctgcccgagctgatggccctgcccgcggagcgctgccgggacttcttcgcc gcgctggtgctcccgccggccctggaccaagcgatggacttggtgctgaccgagatccgc tcgcgcctcacctatctgtgcgccgtgggcctgccctacctgacgctcgaccgtcagtcg cgcaccctctcgggcggggaggtgcagcggatcaatctgaccaccgctctcggcacctcg ctcgtcaacacgctgttcgtgctcgacgagccgagcatcggcctgcacccccgcgacctg gatcgggtgctgggcgtcctgcgccgcctgcgcgaccagggcaattcgctcctggtggtg gagcacgacccgcagttgatgcgggcggcggatcgcatcatcgacatcggtcccggcccc ggggagcacggcggccaggtctgcttccaggggacgcccacagagctattggcggcggac ggctcgctgaccggggactatctggccggccgccgccgggtggccgcgccccgcgccccc aacccgcccgcgccggacggaccctgcatccgcatccgcggggcgcgcgcccacaacctc aagggccttgatgttgcgatcccgctgcaccggctggtggtagtaaccggggtctcgggc tccggcaagtccaccctgatcggggatgtactctaccgggcgctgtgccagcgcaagggt cacccggaggaggccccgggggagttcgacggcatcgacggggacgaactgatcgcggac gtgaccctgctggaccagtccccgatcggccggacctcgcgctccaacccggcaagcttc gtcggcgccctggacgtgctgcgcaagcgcttcgccgcgctgccgctggccaaggagcgc ggctacacggccggcaccttcagcttcaacgccggcaccgggcgctgccccacctgcggg ggcaacggcttcgagcacctggagatgcagttcctctccgacgtctatctgcgctgcccg gactgcgacgggcgccgctaccgggcggaggtcctggagctccggctcccggacccggcg gacgggggcgccgagttgtccatcgccgacgtgctcgacctcacggcgactgaggccctg gtccggttcgccgacgaccgggaactggcgcgggcactggagccgctgaccgccgtgggg ctcggttacctgcgcctgggccagccggtcccgaccctgtccggcggcgaggcgcaacgc ttgaagctggccggacacctgtgcaagacgggacggagcaagggccgcggcggtctcggg tccacgacccaggggctcttgttcctgatggacgagccgaccaccgggctgcacccggcg gacgtcgccgtgctgctggcggcgctgcggcggctgctcgaccagggtcactcgctggtg gtgatcgagcacaacctggacctgatcgcggcggccgactggctgatcgacctgggcccc gagggcggcgacggcggcggcgagctggtcgccgtcggcactccggcggacctggcaagg gagcccgggcgtcccgcccgggctttgctgagccatacggcactggccctgcgcgactat ctggagcaagcagccgccggcccgatgacgccaagcttaggcgacgcactagccgatggg tccgatcgcggcgaagacgccgctcccacaaggatcggcgccatcgccgaggccccgccg cccgcctatttgcaggtcctcccaaccgccccccctatcccctatcccctaacccctaac ccctctcccctatcccctaacccctcaatcgacatcctccacgcccgcgagcacaacctc aaagacctgagcgtcgccatcccccgcggccgcttcaccgtcatcaccggcgtctccggc agcggcaagagcacgctcgccttcgacatcctcttcaacgagggccagcggcgctatctg gagtcgctcaatgcctatgcccgccagttcgtccagcccgccgcccgcgccgacgtggag gcggtccgcggcatcccgcccaccgtcgccatcgaacagcgggtaagccgcggcggggcc aagagcacgctcggcacccagaccgaaatccatcacttcctgcgcctgctctatgtgaag ctcggcacccagcactgcccggggtgcgacctgccgatcgagccgctgggcctcgaggcg atcctcgcgcgcatcctgcgcgaccaggggggccgccaggtcgccgtgatggccccgctg gtcgtcgcccgcaagggcctctacaacgaactggccgcctgggccgcgcgcaaggggtgg ttcgtcctgcgggtggacggcgagcccattgagacccggacctggccccgcctggaccgc ttccgcgagcactccatcgacctgccggtgggtgaggtcagggtcggccccaagaccgag ggcgagttgcgcgccctgctcgatgtggccctggacttaggaaaaggcctggtgcgggtg gtgcaggtcacccgcgggacctggggtccggagaccccctactccacggcccgctcctgc cccggctgcgggcgcgccttcccggagccggacccgcggctcttcagctacaactccaag cacggctggtgcccggcctgcttcggctccgggcttgcgatggccgggttcgatggggag cagaccggggaggaggaccagtggctggactcagggaccgaacaccaaggctgcaccagt tgccggggcgcccgcctgaacccagaggccctgtcggtgcgttttcgcgggcgctccatc gccgaactctctgccctcaccgtcaccgcgaccaccgtggccctggccggctgggagctg accgaacgggagtccgccattgcgcgggacctgctcgcggaggtccgggaacggctcgcc ttcctcgcccaggtgggcctgggttatctgaccctggaccgcggcgcccccaccctctcc ggcggcgaggcccagcgcatccggctcgccgcccagctcggctccaacctgcaaggcgtc tgctatgtgctggacgagcccagcatcgggctgcacccccgggacaaccggctgctgctc aatacactcacgaggctgcgcgaccggggcaacaccgtggtggtggtggagcacgacgag gagaccatccgccgcgccgagcacgtcatcgacctggggccgggggccggggtccagggc ggccgggtggtcgcccaggggacggccgcggacctgatcgctgcccccgattcggttacc ggccgctatctggcgcgccgacgcggtcacggactgggcgagccgcgggcgcggcgcccg ctgcccggcaagggcgagtggcttgccattcgcggggccaggctgcacaacctcaagggg atggacgtgcgggtgccgttgcggcggctgacctgcgtcacgggggtttcggggtcgggg aagtcctcgctggtgcgcgatgtgctggtgcgcagccttcaggggttgttgggggcggcg gatgaggcagtgcgcgtcgggcggcgcggtatcagccctcaagggacggggtcggccgcg gactcgtcgcggcgggacgccgctcccaccgggatggtgcatgggtgcgacggtctctcg ggctggcacgcgctgagccgggtgctggaagtggaccagacccccatcggcaagacgccc cgctcctgccccgccacctatgtcggcttctgggaccgcatccgcaagctcttcgccgcg agcccggaggcgcgcatccagggctggggggccgcgcgcttctccttcaacaccgcgggc gggcgctgccccgcctgcgagggccagggcgtgcagcgtatcgagatgagcttcctgccg gacgtgcgcgtcccctgcgaggtctgcggcggcagccgtttcgaccgcgagacccgcgag gtccgctatctggggctcgacatcggccagatcctggcgctcgacgtggaccgcgcggtc gaggtcttcgccgcccaccccgccatccgccacccgctgaccctgctgcaggaggtcgga ctcggctatctgagcctgggccagccgagcccgaccttgagcggcggcgaggcccagcgc ctcaagctggtcaccgaactcaccaaggcccgccccagcgccgacggtacccatccgcgg ccgaccctctatgtcctggatgaacccacggtcggcctgcacatggccgatgtcgagcgc ctgatcgccgtcctgcaccggctggtcgatgccggccatacggtgattgccatcgagcat gatctcgacctcattgccgcggccgattgggtcatcgacctggggcctgagggtggtgag gcgggcgggcaggtagtggcggaggggacgccggagcagatcgcggcgggcggggacctg ccgacggcggcggctttgcgggagtggttgggcggcacctga

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