Candidatus Thiodictyon syntrophicum: THSYN_20215
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Entry
THSYN_20215 CDS
T05211
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsy03016
]
THSYN_20215
Enzymes [BR:
tsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
THSYN_20215
Transfer RNA biogenesis [BR:
tsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THSYN_20215
Prokaryotic type
THSYN_20215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUB83038
UniProt:
A0A2K8UBS7
LinkDB
All DBs
Position
complement(4822683..4823744)
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AA seq
353 aa
AA seq
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MTHPTGPTWSPFHALPRAHGAPLGTGRLRVEPADFEVEEVLGFPPDGDGDHLLLWVRKTD
QNTEWVAGRLAATAGVDPKDLGYAGLKDRRAVTSQWFSLPRPREREPDWSALAVEGIEVL
AVHPHRRKLRRGALAGNRFRIRVRNWAPDPDRLAERITAIRTLGVPNYFGEQRFGRNGAN
LARADALFHGAIRRPSRHQQGLWLSAARSQVFNQVLAARLTRGDWDRPLPGDCLNLDGSH
SWFPADTIDDTLRGRTARLDLHPTGPLWGRGDPPSQGEVRALEDAVAAAHPGWPAGLARF
GLEQDRRALRLLVPDLGWDLTDRGCELAFELPAGAYATAVLRELMDWGQAGED
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacccgactggaccgacctggagccccttccacgccctcccgcgcgcccacggc
gcccccctgggcaccggccgcctgcgggtcgaacccgcagactttgaagtcgaggaggtc
ttgggcttcccgccggacggtgacggcgaccacctcctgctctgggtgcgcaagaccgac
cagaacaccgaatgggtcgctggccgactcgccgcgaccgctggggtcgacccgaaggat
ttgggctacgccgggctcaaggaccgccgcgccgtcaccagccagtggttctccctgccg
cgcccgcgcgagcgcgaacccgactggtccgccctggccgtcgagggcatcgaggtcctg
gcggtccacccccaccgccgcaaactgcgccgcggcgccctggccggcaaccgcttccgt
atccgggtgcgcaactgggcgcctgacccggaccgactcgccgagcggatcaccgccatc
cgcaccctgggcgtccccaactacttcggcgaacagcgtttcggccgcaacggcgccaac
ctggcccgcgccgacgccctctttcacggcgccatccgccgcccctcgcgccaccagcag
ggcctctggctctccgccgcccgctcccaggtcttcaaccaggtcctggccgcacgcctg
acccgcggcgactgggaccggccgctccccggggattgtctcaacctggacggcagccac
tcctggtttcccgccgacaccatcgacgacaccctgcgcgggcgcaccgcccgcctggac
ctgcaccccaccggccccctctggggccgcggcgacccgcccagccaaggcgaggtccgc
gccctggaggacgccgtggccgccgcccaccctggctggcccgccggcctcgcccgcttc
ggcctggagcaggaccgccgggccctgcggttgctggtgccggacctgggttgggatctg
accgaccgcggctgcgagttggcctttgagctcccggccggggcctacgcgaccgccgtt
ctgcgcgaactgatggactgggggcaggccggcgaagactga
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