Candidatus Thiodictyon syntrophicum: THSYN_20330
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Entry
THSYN_20330 CDS
T05211
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03030
DNA replication
tsy03430
Mismatch repair
tsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THSYN_20330
03430 Mismatch repair
THSYN_20330
03440 Homologous recombination
THSYN_20330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsy03032
]
THSYN_20330
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_20330
Enzymes [BR:
tsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THSYN_20330
DNA replication proteins [BR:
tsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THSYN_20330
DNA repair and recombination proteins [BR:
tsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THSYN_20330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Alpha-amyl_C2
Motif
Other DBs
NCBI-ProteinID:
AUB83059
UniProt:
A0A2K8UCA3
LinkDB
All DBs
Position
complement(4851743..4852471)
Genome browser
AA seq
242 aa
AA seq
DB search
MRQIVLDTETTGLDPREGHRLIEIGCIELIDRRLTRNNFHQYLQPDREIDAAAVEVHGIT
NESLRDKPRFAEIAEAFLEYVTGAELIIHNAAFDCGFIDSELKRWRDDGARINALCAVTD
TLALARRLHPGQRNSLDALCKRYSVDNSHRDLHGALLDAEILADVYLAMTGGQVVMHLGG
EPQFEPGGRKAVTQRGRLDPLRPRLRVVAADAQAQTAHGARLAAIDRASSEGCLWLAEEP
VG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagatcgtcctggataccgagaccactgggttggacccccgggaaggccaccgc
ctgatcgagatcgggtgtatcgagctgatcgatcgccggctgacccgcaacaatttccac
caatatcttcaaccggatcgggagatcgacgccgcggcggtggaagtccatggaatcacc
aacgagtcgctgcgcgacaagccccgctttgcggagattgccgaggccttcctggagtat
gtgacgggggccgagctgatcatccacaacgccgccttcgactgcggctttatcgacagc
gaactcaagcgctggcgcgacgacggggcgcgaatcaatgccctgtgcgcggtcaccgac
accctggcgctggcgcgccgcctgcaccccggccaacgcaacagcctggacgcgctgtgc
aagcgctacagtgtggacaattcccaccgggacctgcatggcgcgctgctcgacgctgag
atcctggccgacgtctatctggccatgaccggcgggcaggtggtcatgcatctgggcggg
gagccgcagttcgagcccgggggccgcaaggccgtgacgcaacgcgggcgtttggacccg
ctgcgaccgcggctgcgggtggtggcggccgatgcccaggcccagaccgcccacggcgcc
cgcctggctgccatcgacagggcgagtagcgaggggtgtctgtggctggcggaggaaccg
gtcggttag
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