Candidatus Thiodictyon syntrophicum: THSYN_23145
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Entry
THSYN_23145 CDS
T05211
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsy03000
]
THSYN_23145
Transcription factors [BR:
tsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
THSYN_23145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF_2
GAF
IstB_IS21
AAA
HTH_30
AAA_16
AAA_2
AAA_19
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AUB83553
UniProt:
A0A2K8UD86
LinkDB
All DBs
Position
5497933..5499606
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AA seq
557 aa
AA seq
DB search
MSNPGACDPDGATSLAAAGGDSRFEDLLTDLAASFINVESEALDGHIQSALRRIVLFLGI
DRATIGRFDDESRQWLRTHSWALPGIAAVPSPITEAQLPYLVGRLRSGLVTLCSHLADLP
PEAAQDTAMLRALDQKSLALFPLIAEGQTLGGLSFGTISAEHPWPEDVVRRLRLISGIFA
NALMRRHKDLALRRALAENVALRERVEAENAVWREEVLHSLDFDELVGTSPALTRVLRQV
EQVAPTDSTVLILGETGTGKDLIATAIHRRSRRAERPLVRVNCAALPATLIESELFGHEK
GAFTGAIARKLGRFEVADGGTLVLDEIGELPLELQAKLLRVLQSGDFERLGSPIARRSDA
RVIAATNRDLATMARAGTFRADLYYRLGVFPIELPPLRERKEDIGLLTAYFVEKLRPKLG
RQITRIPERALAELMAYDWPGNVRELENIVERSLILSPGSSLEVDGLPRMTGDRAMPFAD
SGLGDNRTLAEVERDHIRAVCQTCGWRINGRGNAAERLGINPNTLRSRMQKLGIARPTGQ
NAGETMPAPGTRRVSRP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaatcccggtgcgtgcgatccagacggcgcgacgtcgctggcagcagcgggcggc
gactctcgcttcgaggatctgctgaccgacctggcggcctccttcatcaacgtggaatcc
gaggcgctcgacgggcatatccagtcggccctgcgtcggatcgtgctgtttctggggatc
gaccgggcaacgatcggccgcttcgacgacgagtcccgccaatggttgcggactcactcc
tgggcactgccggggatcgccgcggtcccctcgccgatcacggaggcacagctcccctat
ctggtgggacggctgcgttccgggctcgtcaccctgtgcagccatctcgccgatcttccg
cccgaggcagcccaggacacggccatgctgcgcgcgctggatcaaaagtcgctggcgctc
ttcccgctgatcgccgagggccaaaccctgggcggcttgtcgttcggcaccatcagtgcc
gagcatccctggcccgaggacgtggtgcggcgactgcgcctgatctccgggatcttcgcc
aacgccctcatgcgccggcacaaggacctggcactcaggcgcgccctcgccgagaacgtg
gcactgcgcgagcgggtggaagcggagaacgcggtgtggcgcgaggaggtcctgcactcg
ctcgacttcgacgagttggtcgggaccagcccggccctgacgcgggtgctgcgccaagtg
gagcaagtcgcccccacggacagcaccgtactgatcctgggcgagaccggaaccggcaag
gacctgatcgccaccgccatccaccggcgcagtcgccgagccgagcggccgctggtgcgg
gtgaactgcgccgcactccctgccaccctgatcgagagcgagctattcggtcacgagaag
ggggccttcaccggggccatcgccagaaagctcggccgctttgaggtcgccgacggcggc
accctggtcctggacgagatcggcgagctgcccctggagctccaggccaagctcctgcgc
gtgctccagagcggtgacttcgagcggctgggctcgcccatcgcccgccgctcggacgcg
cgggtgatcgccgccaccaaccgtgacctggccaccatggcccgggccggcacctttcgc
gcggatctctattaccggctcggggtcttccccatcgagctgccgccgctgcgcgagcgc
aaagaggacatcggactcctgacggcctatttcgtcgagaagctgcgcccgaagctgggc
cggcagatcacgcgcatcccggagcgcgcgctcgccgagctgatggcctacgactggccg
ggcaacgttcgcgagctcgagaacatcgtcgagcgctcgctgatcctctcgcccgggtcg
agcctggaggtcgacggactcccgcgcatgacgggcgacagggcgatgccgttcgccgat
tcgggtcttggagacaaccggaccttggcagaggtggaacgcgaccacatccgggccgtt
tgccagacatgcggctggcggatcaacggcaggggcaatgccgcggaacgcttggggatc
aatcccaacaccctgcgctcgcggatgcagaagctcggtatcgcgcgtccgaccgggcag
aacgccggagagacaatgcccgcaccggggacgcgcagggtatcgcggccataa
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