Candidatus Thiodictyon syntrophicum: THSYN_23290
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Entry
THSYN_23290 CDS
T05211
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy00550
Peptidoglycan biosynthesis
tsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THSYN_23290
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsy01002
]
THSYN_23290
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsy01011
]
THSYN_23290
Enzymes [BR:
tsy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
THSYN_23290
Peptidases and inhibitors [BR:
tsy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
THSYN_23290
Peptidoglycan biosynthesis and degradation proteins [BR:
tsy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
THSYN_23290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AUB83581
UniProt:
A0A2K8UEQ8
LinkDB
All DBs
Position
complement(5527624..5528919)
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AA seq
431 aa
AA seq
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MKLQPALLVLCLSVLLPLNLRVAAAPAAPAVAPAPAYTPPPAQAVPAAAPARTAAQTATP
PAAPSAPPTAAVPAAPQAVPSPPVVDAKGYLLIDFNTGAVLAESRADDRLEPASLTKIMT
GYTIYRELLAGHVHLTDPVLISENAWRTGGSKMFIEVGKQVPLEDLLKGMIIQSGNDASV
ALAEHVAGSEQVFAELMNTNAQRLGMTNSHFVNVTGLPDPNHFTTARDIARVTAALIREF
PKFYEWDGTKEYEYNGIKQQNRNRLLWRDATVDGVKTGYTEAAGYCLVASARRDGMRLVS
VVLGAKNPEARAVASLELLNYGFRFFESHLLYPADQPLENLRVWKGDLKELPVGPGRDVY
ATIPRGRYAELSPRLDKAQTLTAPIARGARVGDIVVFLAGTEVSRVPLVALQDVAEGNLW
QRTRDTVWQWF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcaacccgcgctgctcgtcctgtgcctgtccgtcctgctgccgctgaacctg
agggtcgccgcggcgccggccgcccccgcggtcgcgccggccccggcttacacgccgccc
ccggcgcaggccgtcccggccgccgccccggcccgcaccgcggcccagaccgcaacgccg
ccggccgcgccgtcggcacccccgaccgcggcggtcccggccgcgccccaagccgtcccg
tcgccccccgtggtggatgccaagggctatctcctgatcgacttcaacaccggggcggtg
ctggccgagtcccgggccgacgaccgcctggagccggcgagcctgaccaagatcatgacc
ggctacacgatctatcgggagttgctcgcggggcatgtgcacctgaccgacccggtgttg
atcagcgaaaacgcctggcggaccggcggctccaagatgttcatcgaggtcggcaagcag
gtccccctggaggatttgctcaagggcatgatcatccagtccggtaacgatgcaagcgtg
gccctggccgagcatgtggcgggcagcgagcaggtcttcgccgagttgatgaacaccaat
gcccagcgcctgggcatgaccaattcgcacttcgtcaatgtcaccggcctgccggacccc
aaccacttcaccaccgcccgcgacatcgcccgggtcaccgccgccctgatccgcgagttc
cccaagttctatgagtgggacgggaccaaggagtacgaatacaacggcatcaagcagcag
aaccgcaaccgcctgctgtggcgggatgcgaccgtcgatggcgtcaagaccggctacacc
gaggccgccggttactgcctggtggcctccgcccggcgcgacgggatgcgcctggtgtcc
gtggtgctgggcgccaagaacccggaggcgcgcgcggtcgccagtctggaactcctgaac
tacggcttccgtttctttgaaagtcacctgctctatccggccgaccagccgctggagaac
ctgcgggtctggaagggcgacctgaaggaactgccggtcggtccgggccgcgatgtctac
gcgaccatcccgcgcgggcgctacgcggagttgagcccccgtctggacaaggcccagacc
ctgaccgccccgattgcccggggtgcgcgggtcggggacatcgtcgtcttcctcgccggt
accgaggtctcgcgggtgcccctggtggccctccaggacgtggccgagggcaacctctgg
cagcgcaccagggacacggtttggcagtggttctga
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