Candidatus Thiodictyon syntrophicum: THSYN_23840
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Entry
THSYN_23840 CDS
T05211
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THSYN_23840
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsy01007
]
THSYN_23840
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsy03016
]
THSYN_23840
Enzymes [BR:
tsy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
THSYN_23840
Amino acid related enzymes [BR:
tsy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
THSYN_23840
Transfer RNA biogenesis [BR:
tsy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
THSYN_23840
Prokaryotic type
THSYN_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AUB83686
UniProt:
A0A2K8UDP3
LinkDB
All DBs
Position
complement(5635459..5637837)
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AA seq
792 aa
AA seq
DB search
MRFSESWLREWVNPCIDTQTLADQLSMAGLEVDAIAPAAAAFSGVVVGLVLEVAPHPDAG
KLHVCTVDLGQAAPLTIVCGAANVAAGMRVPVATIGAVMPGDFKIKRAKLRGVESFGMIC
SASELGLAETSSGILPLPAEAPVGADFRAWLGLDDACIEVDLTPDRGDCLSIAGLAWEVA
AINDCPLTPVVVEPVAPASDDRFQVTLEAPEHCPRYACRIIRGIDPAAVTPLWMRERLRR
GGIRAISPVVDVTNYVLLELGQPMHGFDLAHLEGEIRVRLAEPRERLHLLNGETIDLRPD
TLVIADAVRPVALAGIMGGAGSAVESETRDILLESAFFAPAGISGKARSYGLHTDSSHRF
ERGVDPGLQVRALERATRLLVAIVGGEPGPVVDMTAAEHLPRRAPLTLRAARCAQVLGLE
LPPETIAGILKRLGMDLVPVAGGWQVTPPSGRFDLVHEVDLIADVGRIHGYDRIPVSHAS
SAAATRARPEAAFDLDRARLALVDRGFQEVITYSFVSPELQARVEPEVKGLALANPISAE
LSVMRPSLWPGLLHTARYNQARQQERVRIFETGLRFRPGPDGLSQEAAIGGLVIGPLDPE
QWGAPTRPVDFFALKADVEALLALTGDLPGFSFVADQHPALHPGQSARIDYAGRPVGRLG
MLHPALAADLDLTGDAFLFELEQAALTTGVLPRFAPISRYPAIRRDLAIVVDEGVAYADI
AGCIRAGAGDLLRELVLFDVYAGENIGAGRKSLALGLILQVSSQTLTDEVVDEAVGRVLT
RLESDFGARLRD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagtgagtcctggctgcgggaatgggtcaatccctgcatcgacacccagacc
cttgcggaccaactcagcatggccggcctcgaggtggacgcgatagcacccgccgccgcg
gccttcagcggtgtggtggtgggcctggtgctggaggtcgcgccccacccggacgccggc
aagctccatgtgtgcacggtggacctgggccaggcggcgccgctgaccatcgtctgcggt
gcggccaatgtcgccgcggggatgcgggtgccggtggcgaccatcggcgccgtcatgccc
ggtgacttcaagatcaagcgcgcgaaactgcgcggagtcgaatccttcggcatgatctgt
tccgccagcgaactgggtctggccgaaacctccagcggcatcctgcccctgcccgccgag
gcgccggtgggtgccgatttccgcgcctggctggggctcgatgacgcctgcatcgaggtc
gacctgacgcccgatcggggcgactgtctgtccatcgccggcctggcctgggaggtggcg
gcgatcaacgattgccccctgaccccggtggtcgtggagccggtcgcgcccgcgagcgat
gaccgcttccaggtcacgctggaggcgcccgaacactgcccgcgctatgcctgccggatc
atccgcggcatcgacccggcggctgtgaccccgctgtggatgcgcgagcgcctacgccgg
ggcggcatccgtgccatcagcccggtggtcgatgtgaccaactatgtgctgctggagctg
ggtcagcccatgcacggcttcgacctggcgcacctggaaggcgagatccgggtgcgcctg
gccgagccgcgcgagcgcctccacctgctgaacggcgagaccatcgacctgcgtccggat
accctggtgatcgccgacgccgtgcgccccgtggccctggccgggatcatgggcggcgcg
ggcagtgctgtggagtccgagacccgcgacatcctgctggagagcgccttctttgccccc
gccgggatcagcggcaaggcgcgcagctatggcctgcacaccgattcatctcaccgcttc
gagcgcggcgtcgacccggggctccaggtccgcgcgctggagcgcgccacccggctcttg
gtcgccatcgtcggcggcgaacccggtccggtggtcgacatgaccgcggccgagcacctg
ccgcggcgtgcgcccctgaccctgcgcgccgcccgttgcgcccaggtcctggggctcgaa
ctgccgccggaaaccatcgccgggatcctgaaacggcttgggatggacctggtgccggtc
gccgggggctggcaggtcacgccgcccagcgggcgcttcgacctggtccacgaggtcgac
ctgatcgccgatgtcgggcgcatccacggctatgaccgcatcccggtcagccatgcgtcg
tccgcggcggccaccagggccagaccggaggccgccttcgacctggatcgggcgcgcctc
gccctagtcgaccggggatttcaggaggtcatcacctacagcttcgtaagcccagagctg
caggcccgggtggagcccgaggtcaaggggctggccctggccaatccgatcagcgccgag
ctctcggtgatgcgcccctcactgtggcccggcctgctccacaccgcccgctacaaccag
gcgcgccagcaggagcgggtgcggatcttcgagaccgggctgcgctttcgccccggcccc
gatggactgtcccaggaggcggcgatcggcggcctggtcatcggtcccctggacccggag
caatggggcgcgccgacacggccggtcgacttcttcgcgctgaaggcggacgtggaggcc
ctgctcgccctgaccggcgacctgcccggtttcagcttcgtcgcggaccagcacccggcc
ctgcaccccggccagagtgcccgtatcgactatgccggtcggcccgtcgggcgcctgggg
atgctccacccggccctggccgcggacctggatctgaccggcgacgcctttctcttcgag
ctggaacaggcggccctgaccaccggcgtgctgccccgcttcgccccgatctcgaggtac
ccggcgatccgccgggatctcgcgatcgtggtggacgagggcgtcgcctacgccgacatt
gccggctgcatccgggccggcgcgggcgatctgctgcgcgaactggtgctgtttgacgtc
tatgccggggaaaatatcggagcggggcgaaaaagtctcgctttgggattgattttacaa
gtatcttctcagacacttaccgacgaggtggtggatgaggcggtggggcgggtgttgacc
cgtctcgagtccgattttggggcacgactgcgggactga
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