Candidatus Thiodictyon syntrophicum: THSYN_24585
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Entry
THSYN_24585 CDS
T05211
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THSYN_24585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsy03000
]
THSYN_24585
Transcription factors [BR:
tsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
THSYN_24585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
AAA
GAF_3
AAA_2
Mg_chelatase
AAA_16
AAA_3
HTH_23
Parvo_NS1
MCM
Motif
Other DBs
NCBI-ProteinID:
AUB83813
UniProt:
A0A2K8UDY7
LinkDB
All DBs
Position
complement(5800395..5802026)
Genome browser
AA seq
543 aa
AA seq
DB search
MNRDPLVPVTATEAARLDLLETQLAALYEVSTVLSRSLDLRQTLREVLRVLHERGRLCYG
LVSLLDEESGELLISALYNKEDADPFEPVSYRPGEGVIGRILEKNQPWILPRVGDEPRFL
DRLNLYQSDLPFIGVPIRIGEGAAVGVFAAQPPVADGLLEERARFLEMVANLIGQAIRLA
RGVEAEQAALREERDKLRREVKGVHGFDSIIGRTQPMRLVFDQVRQVAKWTTTVLIRGES
GTGKELIASAIHYNSPRARAPFIKLNCAALPDNLLESELFGHEKGAFTGAVAMRKGRFEQ
ADGGTLFLDEIGEISPAFQAKLLRVLQEGEFERVGGGRTLKVDVRIIAATNRDLEAEVRA
SEFREDLYYRLNVMPIRMPALRERIEDIPDLARFLVTKVARMQGRELSITDSALRILMRH
DWPGNVRELENCMERAAVMSADGTIDRGVIELTGLDVSTWDGRPAGATLGTAPGSGADPG
PESSADSGPKVDLDDPDLDERERVIAALEEAGWVQAKAARLLNMTPRQIAYRIQTLNIKV
RQF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaccccctggtaccggtcaccgccacggaggcggcgcggctggatctgctg
gagacccagttggccgcactctacgaggtcagcaccgtgctcagccgctcgcttgatctg
cgccagacgctgcgcgaggtcctgcgggtgctgcacgagcgcggccggctctgttacgga
ctggtcagcctgctcgatgaggagagcggcgagctgctgatcagcgccctctacaacaaa
gaggatgccgaccccttcgagccggtcagctaccgccccggcgagggcgtgatcgggcgc
atcctggagaaaaaccagccctggattctgccccgggtaggggacgagccgcgcttcctg
gaccgcctgaacctctaccaatcggacctgcccttcatcggcgtgcccatccgcatcggc
gagggcgccgcggtcggcgtcttcgccgcccagccgccggtggccgacggcctgctggag
gagcgcgcccgcttcctggagatggtcgccaacctcatcggccaggccatccgcctggcg
cgcggggtggaggccgaacaggcggccctgcgcgaggagcgcgacaagctgcgccgcgag
gtcaagggcgtccacggcttcgacagcatcatcgggcgcacccagccgatgcgcctggtc
ttcgaccaggtccgccaggtcgccaagtggaccaccaccgtgctcattcgcggcgagtcc
ggcaccggcaaggaactgatcgccagcgccatccactacaactcaccgcgcgcccgcgcc
cccttcatcaagctcaactgcgccgcgctcccggacaacctgctggagtccgaactcttc
gggcacgaaaagggcgccttcaccggcgccgtggccatgcgcaagggccgcttcgagcag
gccgacggcggcaccctgttcttagacgagatcggcgagatcagccccgccttccaggcc
aagctcctgcgcgtactccaggagggcgagttcgagcgggtcggcggcggccggacgctg
aaggtcgacgtgcgcatcatcgccgccaccaaccgggatcttgaggccgaggtgcgcgcc
tccgagtttcgcgaggacctctactaccggctcaacgtcatgcccatccgcatgcccgcc
ctgcgcgaacgcattgaggacatcccggatctcgcccgcttcctggtcaccaaggtcgcg
cggatgcagggccgggagctctcgatcaccgacagtgccctgcgcatcctcatgcgccac
gactggcccggcaatgtgcgggagcttgagaactgcatggagcgcgcggccgtcatgagc
gccgacggcaccatcgaccgcggcgtcatcgaactcaccggcctggatgtcagcacctgg
gacgggcggcccgccggcgccaccctggggaccgcgcccggcagcggtgccgatccaggc
cccgagtcctcggccgactcaggccccaaggtcgacctggacgacccggatctcgacgaa
cgcgagcgcgtcatcgccgccctggaagaggccggctgggtccaggccaaggccgcgcgc
ctgctcaacatgacaccgcggcagattgcctatcggatccagacgctcaacatcaaggtg
cgccagttctga
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integrated database retrieval system
