Trichothermofontia sichuanensis: OOK60_03730
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Entry
OOK60_03730 CDS
T09010
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OOK60_03730 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsz03019
]
OOK60_03730 (rnc)
03009 Ribosome biogenesis [BR:
tsz03009
]
OOK60_03730 (rnc)
03036 Chromosome and associated proteins [BR:
tsz03036
]
OOK60_03730 (rnc)
Enzymes [BR:
tsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OOK60_03730 (rnc)
Messenger RNA biogenesis [BR:
tsz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OOK60_03730 (rnc)
Ribosome biogenesis [BR:
tsz03009
]
Eukaryotic type
90S particles
RNase
OOK60_03730 (rnc)
Prokaryotic type
rRNA processing factors
OOK60_03730 (rnc)
Chromosome and associated proteins [BR:
tsz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OOK60_03730 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
HEPN_Swt1
Ribonuclease_3
dsrm
RM44_endonuclase
ATP-synt_VA_C
CsmB
DUF3698
Sec3_C_2
Cwc21_C
WipA_N
Motif
Other DBs
NCBI-ProteinID:
UZQ55197
LinkDB
All DBs
Position
complement(880283..881557)
Genome browser
AA seq
424 aa
AA seq
DB search
MEFSNQERIGRALESLRKVLYPYVEQRLKAIYGENWEKQALSHLKEHHKAKQKKQKSKDI
LFEDISALLIALIREWEIFKNSLSQSDRALISELLEVRNNWAHQANFSTDDTYRSVDSIW
RLLRSIALSKVVDVDQQLIDEVDKQRQDILRLLAQEQPRQEIRVTSVSPAEEACIREKFR
ELLERLPFRNAALLKQALTHTSYKYENPNTGEDNEQLEFLGDALLTFLSADFLYKRNPDL
REGEMTNLRKNLVDNARLAQFAEQLQLGQWIQLGRGEQLSGGRTKSSLLSNTFEAVVGAY
YLDAGIEAVRELVEPFFETVSNAISSTENTARQSTQTKDVKNQLQEYVLSPNYQQYVLSP
NYPAKPDNKLPKYDTQRTGGTDNAPVFTSIVSVAGRELGRGEDRSKKEAERRAAEDALRR
LGVL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaatttagcaatcaagaaaggattggcagagcactggaatccctgcggaaggttcta
tatccttatgttgaacagcggctcaaagctatttatggagaaaattgggaaaaacaagct
ttatcgcacctaaaagaacatcacaaagcgaaacagaaaaaacagaaaagtaaggatatc
cttttcgaagatatttctgcattgttaatagcgctaattagagaatgggagatattcaag
aattctctcagtcaatccgatcgtgcacttattagcgaattactggaagttcgtaacaac
tgggcgcaccaagctaacttttctacggatgatacctatcggtcagtagacagtatatgg
aggttattaaggtccatagcactatcgaaggtcgtcgatgttgatcaacagctaattgat
gaggttgataaacagcgacaggatattcttcgccttttagcacaagagcaaccaaggcag
gaaataagagtcacatctgtttctccggctgaggaagcctgcatcagagaaaaatttaga
gagttattagaacgtctgccattccgaaatgcagctcttttgaagcaagccctaacccac
acctcctacaagtacgaaaaccccaatactggggaagataatgaacagttggaatttcta
ggagatgccttactgacattcctaagtgctgacttcttgtataagaggaatccagactta
cgggaaggtgaaatgaccaatctccgtaagaacttagttgacaatgctcggctcgcacaa
ttcgctgaacaattacaactcggccaatggatacaacttggcaggggtgagcagcttagt
gggggacgtaccaaatcatcattactgagtaatacttttgaagcagttgtcggagcttat
tacttagatgcaggaatcgaagcagtgcgtgaactggttgagccgtttttcgaaacagtg
agtaatgccatatccagcaccgagaacactgctcgtcaaagtactcagactaaagatgtg
aaaaatcaattacaagaatatgttctgagtccaaattatcaacaatatgttctcagccca
aattatcctgctaagcccgataataaattacctaaatatgacacccagcgtactggtggc
acagacaatgctccagtatttacctcgatagtttctgtggctggtcgtgagcttggcagg
ggtgaagatcgcagtaaaaaagaagcagaaagacgtgcagctgaagatgcgctaagaagg
cttggggtgctatag
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