Trichothermofontia sichuanensis: OOK60_05260
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Entry
OOK60_05260 CDS
T09010
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsz03009
]
OOK60_05260 (rimO)
Enzymes [BR:
tsz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OOK60_05260 (rimO)
Ribosome biogenesis [BR:
tsz03009
]
Prokaryotic type
ribosomal protein modification factors
OOK60_05260 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
UZQ55483
LinkDB
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Position
1224695..1226008
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AA seq
437 aa
AA seq
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MVTKPTIAITHLGCEKNRIDSEHMLGLLVQAGYPVDSDEEQADYVVVNTCSFIAAAREES
VRTLVELAEANKKIVITGCMAQHFQEILLEEIPEAVAVVGTGDYHKIVEVIERAEAGERV
KEITTEPTYLADELTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRSIESIVA
EAERLAAEGVQELILISQITTNYGLDLYGKPRLADLLRALGRVDIPWIRMHYAYPTGLTP
DVLAAMQATANVLPYLDLPLQHSHPEILRAMNRPWQGRVNDEIIDRLKTALPGATLRTTF
IVGFPGETEAHFEHLLNFVQRHEFDHVGVFTFSAEEGTPAYDLPNPVPQSVMDERREALM
QVQQPISLRHNQAQVGQVVDVLIEQENPATGELIGRSARFAPEVDGLVYLQGSARLGTII
PAKITHADVYDLYGEVP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggttactaagcccacgatcgccattacccaccttggctgcgagaaaaaccgcattgat
agcgaacacatgctcggcttgctggtgcaagcgggttaccccgtcgatagcgatgaggag
caggcggattacgtggtggtcaatacctgtagctttattgcagccgcccgtgaagagtcg
gtgcggacgctggtggaactggcggaggctaataagaagattgtgattaccggctgtatg
gcccagcatttccaggaaatcttgctggaggagatcccagaggccgtggccgtggtcggt
accggtgactaccacaagattgtcgaggtaatcgaacgggcggaagccggagagcgagtc
aaggaaattaccaccgaacccacctaccttgccgatgagttgacgccccgctatcgcacg
acaacggaaggggtggcttacctgcgagtagcggagggctgtgattaccggtgcgccttt
tgcattattccccacctgcgcgggaatcagcgatcgcgctccattgaatcgatcgtcgca
gaggctgaacgtcttgcggcagagggcgtacaggaattaattttgatttcacaaattacc
acaaactacggtttagatctctacggcaaaccgcgcttggcggatctgctgcgtgccctt
ggacgggtggacattccctggattcggatgcattatgcctatcccacgggcctcaccccc
gatgtgctggcagccatgcaagcaactgccaatgtgttgccttatttggatctaccccta
caacactcccatccagagatcctgcgggcaatgaatcgtccctggcaaggtcgggtgaat
gatgagattatcgatcgccttaaaacagcgctgcccggtgccaccctccgcacgaccttt
atcgtggggtttccgggggaaaccgaagcccattttgagcacttactcaactttgtccag
cgtcatgaatttgatcatgtaggcgtctttaccttttccgcagaggaaggtacccctgct
tacgatttgcccaatcctgtgcctcaatctgtcatggatgagcggcgtgaagctctgatg
caagtccagcagccgatttccttgcgccataaccaggcccaagtgggtcaggtcgtggat
gttctcattgagcaggaaaatccagcgaccggcgaattaatcgggcgatcggctcgcttt
gccccagaggtagacggtctggtatacctgcaagggagtgcccggttaggtacaattatc
ccggcgaaaattacccatgccgatgtttacgacctctacggagaagtgccttaa
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