Trichothermofontia sichuanensis: OOK60_05405
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Entry
OOK60_05405 CDS
T09010
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsz03021
]
OOK60_05405
Transcription machinery [BR:
tsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OOK60_05405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
Sigma70_r4_2
HTH_20
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UZQ55512
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Position
1262290..1263246
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AA seq
318 aa
AA seq
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MKTSQRSTDLVRAYLREIGRVPLLTHDQEIEFGRQVQRLAKLQKNKENLINSLGHEPTLS
EWAACVDLSESELSQAITEGETAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGM
QRGVEKFDPAKGYRFSTYAYWWIRQAITRAIAEKGRTIRLPIHITEKLNKIKKTQRQLSQ
QLGRAATTAELAAALDLKPEQVREYLERSRQPLSLDLRVGDNQDTELVELLEDAGPQPED
YVKQNALRQDLETLMADLTPQQREVLALRFGLEDGRQLTLAKIGDRLNISRERVRQIERE
ALTKLRKRKGDMHEYLAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatctcagcgttcaacagacttagtgcgggcctacctgcgggagattggtcgg
gtacccttactcacccacgaccaggaaattgaatttggtcgtcaggtccagcgcttagcg
aaacttcagaaaaataaggaaaatttaataaactccctgggtcatgagccaacactgagt
gagtgggcggcctgtgtcgatctgtcggaaagcgaactgtcccaagccattacggagggg
gagacggctaagcgcaagatggtggaggccaacctgcggttggtggtttcggtggcgaag
aagtacatcaagcgcaatgtggatctgctcgacctgatccaggagggcacgatcgggatg
caacggggggtagagaaattcgatccggccaagggctatcgcttttctacctatgcttac
tggtggattcgccaagccattacgcgggcgatcgctgagaaggggcgtaccattcgtctg
ccgatccacatcaccgagaagctgaataagatcaaaaaaacccaacgccagttatcgcaa
cagttggggcgggctgcgacgacggcggagttagcggctgctctggatctgaaacccgag
caggtccgggagtatctggagcgatcgcgccagcccctctcccttgatttgcgggtgggg
gataaccaagatacggagttggtggaattgctggaggatgcggggccacaaccggaggac
tacgtgaagcaaaatgccctgcgtcaagatctggaaactctcatggcggatctgacgccg
cagcaacgggaagtcttggccctgcgctttggtctggaagacgggcggcaattaaccctg
gccaaaattggcgatcgtctcaatatcagccgtgagcgcgtccggcagatcgagcgggaa
gccctcaccaagctgcgcaagcgtaagggtgatatgcacgaatacctggcgagttaa
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