Trichothermofontia sichuanensis: OOK60_05440
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Entry
OOK60_05440 CDS
T09010
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsz03400
]
OOK60_05440 (sbcD)
DNA repair and recombination proteins [BR:
tsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OOK60_05440 (sbcD)
Archaeal homologous recombinant proteins
OOK60_05440 (sbcD)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UZQ55519
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Position
complement(1273356..1274732)
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AA seq
458 aa
AA seq
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MIKLLHLSDIHLGSGFSHGRVNPQTGLNTRLEDFVQTLGRCIDRALAEPVDLVLFGGDAF
PDATPLPLVQEAFAREFCRLVAAQIPTVLLVGNHDQHAQGQGGASLCIYRTLGVPGFIVG
DRLETHRIETRNGPVQVITLPWVTRSMLLTRPETEGLSLAAVNQLLIDRLRVALEGEIRS
LDPDVPTVLLGHLMVDTARYGAERFLAVGKGFTVPLSLLTRDCFDYVALGHVHRHQVLCQ
SPWVVYPGSIERVDFSEEKEAKGFMLVTLARRQTQAQFCPLPVRRFLTIQVDLASAEDPQ
ATLLAAIAPDQVQDAVVRLVYQLRPEQLSAIDNRTLHDALALAHSYTIQPELVSQWTRSR
VPELGVGVNIDPLDALKAYLDSRPDLQELAPDLLTTAAAMLAANDDADRPTEPAEQPVTV
AAGIPPEPDPLPSRGPAIAPPLPQADCYSGQDTQLRLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagttactccacctgtcggatattcacctaggtagtggattttcccacggacgg
gttaatcctcaaacggggttgaatacccgcttggaagattttgtccaaaccctgggtcgg
tgtatcgatcgtgccttggcggaaccggtcgatctggtcctgtttgggggagatgctttt
cccgatgccacgccactgccgctggtgcaggaagcgtttgcccgtgagttttgccgcctg
gttgcggcccaaattcccaccgtgttgctggtcggcaaccatgaccaacatgctcagggt
cagggaggggcgagtttgtgtatttatcgcactctgggggtgccgggatttatcgtcggc
gatcggctggaaacccatcgcattgaaacccgcaatgggccggtacaggtgatcacctta
ccgtgggtaacgcgatcgatgctcttaacccgacccgaaaccgaaggtctctcgttagct
gcggttaatcagttattgatcgatcgcctgcgggtggctttggaaggtgaaattcgatcc
ctcgatcccgatgtgcccacggttttattggggcatttgatggtggatacggctcgctat
ggggcggagcggtttttggccgtgggtaaggggtttaccgttcccctatccctgttaacc
cgcgattgttttgactatgtggccctcggtcacgtccaccgccaccaggtgctctgccaa
tcgccgtgggtggtctatcctggcagtattgaacgggttgattttagcgaagagaaagaa
gctaaaggctttatgctggtcaccctggcacggcggcaaacccaggcccagttctgtccc
ctacccgtgcggcggtttctgactattcaggtagatctggcgagtgctgaggatccccaa
gcaaccctattagccgcgatcgcgccggatcaggttcaggatgcggtggttcgtcttgtc
taccagctccgaccggagcaactcagtgcgatcgacaaccgaacacttcacgacgccctc
gcccttgcccacagctataccatccagccagagttggtcagtcaatggacgcgatcgcgg
gtgccagaattgggggtaggggtcaatatcgaccctctggatgccctgaaagcctatctc
gacagccgccctgatctccaggaactggcccctgatctcctgaccactgccgcggcgatg
cttgcagctaatgatgatgccgacaggccaaccgagccagcggaacagccggtgactgtc
gccgcaggaataccccctgagccagaccccttgccttcccgtgggccggcaatcgccccc
ccgctcccccaagccgactgctatagtgggcaggatacccaattacggttgctctag
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