Trichothermofontia sichuanensis: OOK60_06230
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Entry
OOK60_06230 CDS
T09010
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsz03400
]
OOK60_06230
Enzymes [BR:
tsz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OOK60_06230
DNA repair and recombination proteins [BR:
tsz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OOK60_06230
Prokaryotic type
OOK60_06230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
GcvP2_C
Motif
Other DBs
NCBI-ProteinID:
UZQ55667
LinkDB
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Position
complement(1464710..1466149)
Genome browser
AA seq
479 aa
AA seq
DB search
MPELILFWHRRDLRLTDNWGISQAFQRSPKIVGLFCFDPNLLEQDDVAPVRIAYLLGCLQ
SLQASYQALGSQLLLLQADPVQAIPAIATTLGATGVAWNRDVEPYARSRDAQVAAALQAR
GITASQTWDHLMHPPDAITTATGTPYTVYTPFWKNWSSHPKATPSDRPACLQGLTAAEQD
LADQSGCFTQLPTAQALGFPWAGELLIEPGEGAAQRMLNAFCDRALTSYAEQRNFPGIAG
TSQLSAALKLGAIGIRTLWQAASEVATQVRSEEALISIRTWQQELAWREFYHHALYHFPE
LTQGPYNRIFADFPWQNNEDHFEAWCAGRTGYPIVDAAMRQLNETGWMHNRCRMIVASFL
TKDLLIDWQWGEKYFMQHLIDGDLAPNNGGWQWSASCGMDPKPLRIFNPASQASKFDPEA
DYIRQWLPELRSVDTAALVTGKIEPGECDRWGYVTPIVDHHQQQQRFKDLYQRQKNRQG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactcattctcttttggcatcgtcgcgatctacgcctaacagataactggggc
attagccaagcctttcaacgcagtcctaagatcgttgggctattctgctttgatcccaac
ctcttggagcaggatgatgttgccccagtacggattgcttacctgctcggttgtcttcag
agtctccaggctagttatcaagccctcggcagtcagctcttactgctacaggctgatcct
gtccaagcgattccggcgatcgccactaccctcggcgctaccggcgttgcctggaaccgg
gatgtggaaccctacgcccgatcgcgggatgcccaggtcgctgcggcgcttcaagcacgg
gggattaccgccagtcaaacctgggatcacctcatgcatcccccggacgctattactaca
gctacgggaacgccttataccgtctatacaccgttctggaaaaattggtctagccatccc
aaagcaactcctagcgatcgtcccgcttgcctccaggggttaactgccgctgaacaggac
ctagcagaccaatccggttgtttcacccaactgccaacggcgcaagccttgggttttccg
tgggcgggtgagttgctgatcgaaccgggggaaggggctgcccagcggatgttgaatgcg
ttttgcgatcgtgcccttaccagctatgccgaacagcgcaattttccgggtattgcaggt
acttcgcaactaagtgctgccttgaagttaggcgcgatcgggattcggaccctgtggcag
gcggccagtgaggtggctacccaggtccgcagcgaagaagccctgatcagtattcgcact
tggcagcaggaattggcttggcgggagttttatcaccatgccctttaccactttcccgaa
ctgacccaaggtccctacaatcgcatttttgctgatttcccctggcagaataatgaggac
cattttgaagcttggtgtgcagggcggacggggtatccgatcgtcgatgcggccatgcgc
cagttaaacgaaacgggctggatgcataaccgctgtcggatgattgtggccagtttttta
accaaggatttgctaattgattggcaatggggagaaaagtactttatgcaacacctgatt
gatggtgatttagccccaaataatggggggtggcaatggagtgcttcctgcggcatggac
cccaaacccctgcgcatttttaatcctgccagtcaggccagcaaatttgacccggaggcg
gactatatccgtcaatggttaccagagttgcgcagtgtggacacggcagcattggttacg
gggaaaatcgagccaggggagtgcgatcgctggggttatgtaactccgatcgtggatcat
caccaacaacagcagcggtttaaagatctgtatcagcgacaaaaaaatcgccaagggtaa
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