Trichothermofontia sichuanensis: OOK60_06805
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Entry
OOK60_06805 CDS
T09010
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tsz
Trichothermofontia sichuanensis
Pathway
tsz03030
DNA replication
tsz03430
Mismatch repair
tsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOK60_06805 (holA)
03430 Mismatch repair
OOK60_06805 (holA)
03440 Homologous recombination
OOK60_06805 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsz03032
]
OOK60_06805 (holA)
03400 DNA repair and recombination proteins [BR:
tsz03400
]
OOK60_06805 (holA)
Enzymes [BR:
tsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOK60_06805 (holA)
DNA replication proteins [BR:
tsz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OOK60_06805 (holA)
DNA repair and recombination proteins [BR:
tsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OOK60_06805 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
UZQ55775
LinkDB
All DBs
Position
1609722..1610756
Genome browser
AA seq
344 aa
AA seq
DB search
MPIYLYWGEDEFAMQRAIANLRDRVLDPNWQSFNYDRLTPDQPNAIVQGLNQAMTPPFGA
GSRLVWLVNTALVGGGSKGDLTETVLAELERTLPQIPDNSVLLLTTPNKPDNRLKSTKLL
QKYATIEEFSPIPPWQSEQLAERVRQAAQEIDLKLTPAAIAFLAEAIGNDTRQLYMDLEK
LRLFAGSQTHPLAVAEIEGLITSSTQNSLKLAEAIRQGNTAQALGLVADLIQRNEHALAI
VATLVHQFRTWLWVKLMTTTGEPDERAIAAAAEIGNPKRIYYFKQAVRSLSLSQLQATLP
LLLELELSLKQGTEALPTLQTMVVRLCEVCRSHGCDGRVTDRPR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttacctctactggggtgaagatgagtttgccatgcagcgggcgatcgccaac
ctgcgcgatcgggtccttgatcccaattggcaaagctttaactacgatcgcctcacccct
gaccaacccaacgcgattgtccaggggctaaaccaggccatgacccccccctttggggca
ggcagtcgcttggtctggctggtgaataccgccctagtcggtggcgggagcaaaggagac
ctcaccgaaacggtgctggcagaactggagcggaccctgccccagattcccgataacagt
gtgctactcctcacaacccccaataaacctgataatcgcctcaaatccactaaattactg
caaaaatacgccactatcgaggaattttcccccattcccccctggcagagcgagcagttg
gccgagcgggtacgacaagctgcccaggaaatcgatctgaaactgacaccggcggcaatc
gccttcctagcagaggcgatcggtaacgatacccggcaattgtacatggatctggagaaa
ctccgcctgtttgctgggtcccagactcaccccctcgcagtggccgagatcgaggggttg
attactagcagcacccagaatagcctgaaattggccgaggcgatccggcaaggcaacacc
gctcaagccctagggttggtggctgatttaatccaacgcaatgaacatgccctcgcgatc
gtggccaccttggtccatcagttccgtacctggctctgggttaagctgatgaccactacg
ggggaaccggacgagcgggcgatcgcggcagcagcggagattggtaaccctaaacgcatc
tattatttcaagcaggcggtgcgatcgctgtcgctgtcgcaactacaagccacccttccc
ctgttgttagagctagaactcagtctgaaacagggaaccgaagcactacccaccttgcaa
acgatggtcgtgcggctgtgtgaggtgtgtcgatcgcacggatgcgacggtagggttacc
gaccgcccacggtga
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