Trichothermofontia sichuanensis: OOK60_09570
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Entry
OOK60_09570 CDS
T09010
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsz03016
]
OOK60_09570
Enzymes [BR:
tsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OOK60_09570
Transfer RNA biogenesis [BR:
tsz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OOK60_09570
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Arnt_C
Motif
Other DBs
NCBI-ProteinID:
UZQ52785
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Position
2264422..2266461
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AA seq
679 aa
AA seq
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MQKGTLIEFWLHGHRHLAVVDRPKDNKHWIVVDHLNQAHTINPRQITYTIGPGYTTAEIP
AFQAAVATQLDPDSLEVAWEILVEEGRSVDPAAMSTLLFADTEPVNCYAAHCLLSEDKLY
FKQKGDVYEPRSVSQVADLKHQATIAQQRQQEWETLLSRLQQALAQPGSVDWQASDRPRL
EALERYATFKEEANPRDATQAQEVLAALQRPETPEAAFDLLVALGLWQPHENLFLRRSQI
PVQFPPTVLAMATSRLDAPPADADRDRVDLTHLKVYTIDDISTLEIDDGLSWEVLPDGRE
QLWIHIADPTRWVSPGDELDLEARRRSTTLYLPTGMIPMFPPEIATGPMSLNQGQVCCAL
SFGVILTPAGAVDAYTIVPSRIRPTYRLTYEDVDEMLELGVQAEPEIAAIARWGMVRSQW
RQSQGAIAIHMPEASIKVQDDEVTIQLLDNSLARQLVAEMMILAGEVAARYGQAHNLPLP
FRNQPQPELPPETELLQLPPGPVRYSAIRRCMPRSEVSLSPARHASLGLDTYAQVTSPIR
RYSDLLAHFQIKAHLRGETPPFSAEQLQEVLMSVSAAAQEAVWVERQTNRYWGLEFLRRH
ATDLWQGLVLRWLREHESLALVLLEELGLELAMRFDRPVALGEQLTLRVAYVDPRNDVIH
LREVDTPTVTDLPKVEQLA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaggtactctgattgaattctggctacatggtcatcgccatctggcagtggtc
gatcgtcccaaagacaataaacactggattgtggttgatcaccttaaccaggctcacact
atcaatccccgtcaaatcacctacacgatcggtcctggctatacaacggctgaaatcccg
gcctttcaggcggcggttgccactcagcttgaccccgatagcctggaagtggcgtgggaa
attctggtggaagaagggcgttctgttgacccggcggccatgtctaccctactgttcgct
gataccgagccagtgaactgctacgcggcccattgcctcctgtccgaggacaagctgtat
ttcaaacagaaaggcgatgtttacgaacctcgctctgtcagccaagtggctgatctcaaa
catcaggcaactatcgcccagcaacggcagcaggagtgggaaacgctcctcagccgcctc
cagcaagccctagcgcaaccgggtagtgttgattggcaggccagcgatcgcccccgcctg
gaagctctcgaacgctatgccacctttaaggaagaagctaacccacgggatgccacccag
gctcaggaagtgcttgcagcgctgcaacgtccagagacaccggaagccgcttttgatcta
ttggtggccctgggtctctggcaaccccatgaaaatctcttcctgcggcgcagtcaaatt
cctgtccagttccctcctacggtactcgctatggccacctctcgtcttgacgccccgccg
gcggatgccgatcgcgatcgcgttgatctgacccatctcaaggtctacacgatcgatgac
atcagcacgctagaaattgacgatggcctgagttgggaagtcttaccggatggccgggaa
cagttgtggatccatattgctgacccgacccgctgggtatcgccgggggatgagctggat
ctcgaagcccgccgccggagtaccacgctctacctccccacgggcatgattcccatgttt
ccgccggagattgccaccggccccatgagcttgaatcaggggcaggtttgctgtgccctc
agttttggggtgatcctgacgccggcaggcgctgtggatgcctataccatcgtccccagt
cggattaggcccacctatcgcctgacctacgaagatgtggatgagatgctggaattgggg
gtgcaggcggagccagaaattgctgcgatcgcccggtggggaatggtgcgatcgcagtgg
cgacagtcccagggggctattgccattcacatgccggaggcatcgatcaaggtccaggat
gatgaagtcacgattcagcttctagataattccctggcccgccaactggtggcggaaatg
atgattctggcgggggaagtggctgcccgctatggccaagctcataacttgccgctgccc
ttccggaaccagccccaacccgaactgccgccggaaacagagttactgcaactgccgccg
ggtcccgtgcgctatagtgcgattcgccgctgtatgccccgcagtgaggtgagtctgtcg
cctgcgcgccacgcaagccttggcctcgatacctatgcccaggttacttcccctattcgt
cgctacagtgacctgttggcccatttccagattaaggcccacctgcggggggaaaccccg
cctttctcggcagaacagttgcaggaggtgctgatgagcgtcagcgccgccgcccaggaa
gccgtctgggtggagcggcaaaccaatcgttactgggggttagaattcctccggcgtcat
gctacggatctttggcaggggttagtcctgcgttggttacgagaacatgaaagtttggcc
ttggtgctgctcgaagagttggggctagagttagccatgcgcttcgatcgtccggtggcg
cttggggaacaattaactctgcgggtggcctatgtcgatccccgcaatgatgtgattcac
ctgcgggaagtcgataccccaacagtaactgacttgcctaaggtggaacagttggcctag
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