Trichothermofontia sichuanensis: OOK60_09830
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Entry
OOK60_09830 CDS
T09010
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tsz
Trichothermofontia sichuanensis
Pathway
tsz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OOK60_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsz03021
]
OOK60_09830
03400 DNA repair and recombination proteins [BR:
tsz03400
]
OOK60_09830
Enzymes [BR:
tsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OOK60_09830
Transcription machinery [BR:
tsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OOK60_09830
DNA repair and recombination proteins [BR:
tsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OOK60_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UZQ52835
LinkDB
All DBs
Position
2316893..2317828
Genome browser
AA seq
311 aa
AA seq
DB search
MTPFECKVESNEYNYGKFILEPLDRGQGTTVGNALRRVLLSNLEGAAVTAVRIAGVNHEF
ATIPGVREDVLDILLNMKKVIFRNYSSQPQIGRLRIHGPATVTAGSFSEDLPTDLEVINT
DQYIATLAAGATLEMEFRVERGKGYRTVDRMRDETTAIDFLQIDAVFMPVTRVNYSVEAI
HSGPGIEQDRLILEVWTNGSYTPKEALSQAAEILTNLFSPLKDISSQTPGPDETKPGDDR
EHQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGQKSAEEVIQALQDRL
GITLPQEKSHK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgactccgtttgaatgcaaggttgagtccaatgagtataactacggtaagtttatcctg
gaacccctggatcgggggcaggggacgactgttggcaatgccctgcggcgggtgttgtta
tcaaacttggaaggggcggcggtgacggcagttcggatcgctggtgtgaaccatgaattt
gctaccattccaggggtacgggaggatgtgttggacattctcctgaatatgaagaaggtg
atctttcgtaattattcttcccaaccccagattgggcgcttgcggattcacggaccggcg
acggtgacagcgggaagctttagtgaagacttgcccactgatctggaagtgattaacaca
gaccaatatattgcgacgctggcggcgggagccacgctggagatggaattccgggtcgaa
cgcggcaagggctatcgtacggttgatcggatgcgggatgaaacaaccgcgatcgatttt
ctccagatcgatgctgtttttatgccggttacccgtgtgaattatagtgtggaagcgatt
catagtggtcctggcattgagcaggatcgtttgatcctggaagtgtggaccaatggcagt
tatactcccaaagaggcgctcagtcaggcagccgagatcttaaccaatctgtttagtccc
ctgaaggatatctcttcccagacaccgggaccggatgaaacgaagccaggtgacgatcgc
gagcaccagattccgattgaggagttgcagttgtcggttcgggcctataactgcttgaag
cgggcgcagatcaactctgtcgctgacctgcttgactactcccaggaagacctgttggag
atcaagaactttggccagaagtctgcggaggaagttatccaggcccttcaggatcgccta
gggattactttacctcaggaaaagtcccataaatga
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