Trichothermofontia sichuanensis: OOK60_11755
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Entry
OOK60_11755 CDS
T09010
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsz03021
]
OOK60_11755
Transcription machinery [BR:
tsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OOK60_11755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
KORA
Sigma70_ECF
HTH_24
HTH_23
HTH_Crp_2
HTH_3
HTH_17
HTH_11
MarR_2
HTH_38
SpoIIID
HTH_28
GerE
HTH_10
HTH_30
REC104
LacI
DUF134
Motif
Other DBs
NCBI-ProteinID:
UZQ53186
LinkDB
All DBs
Position
2770582..2771358
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AA seq
258 aa
AA seq
DB search
MPSAVTSDLKNETLQLLREYQLSPSPELRNRLTQLNYGLVRREAHHWVSQCTESYEDLVQ
VGCIGLMRAIERFDMARGHAFSSFAIPYIRGEIQHYLRDKGTPVRIPRRWVALQRQAMWV
TQALQQELGRQPTDAEIAKALEIPLTEWQEIKLAHQNRALLSLDAPVRDEVDGTTSLGDL
IPDNRCRSFQLAQEDRIRLQQALAKVEERTRDVLEFVFLHDLTQKETAERLGVSSVTVSR
HVKRGLEALKKIMKGADD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcgccgttacaagcgatcttaaaaacgagaccctgcaattattgcgcgagtac
caactgtccccctcgccggagttgcggaatcgcttaacccaactcaactacgggttagtg
cgacgggaggcgcatcactgggtcagccaatgtacggagagctacgaggatctcgtccaa
gtcggctgtatcggtttgatgcgggcgatcgaacggtttgatatggcacggggccacgcc
tttagttcctttgccatcccctatattcggggtgaaattcagcactacctgcgggataag
gggacaccggtgcgcatcccgcgccgttgggtagccctccaacgccaagccatgtgggta
acccaagccctgcaacaggaactcggacgccagccgacagatgcggaaattgcaaaggcc
ctcgaaattccgcttaccgaatggcaggagatcaaactggcgcaccaaaaccgtgctctg
ctgagcctggatgcccctgtgcgagacgaagtggacggtaccacctccttgggtgacctt
attcccgataaccgttgccggagtttccaactggcccaggaggaccggattcgcctccag
caagccctggcaaaggtggaggaacgcacccgcgatgtgctggaatttgtctttctccat
gacctaacccagaaggaaacagcggaacggctgggagtcagttcggttacggtgtcacgt
catgtgaagcgggggctagaggcactaaagaaaattatgaagggagcagatgactaa
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integrated database retrieval system
