Trichothermofontia sichuanensis: OOK60_13820
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Entry
OOK60_13820 CDS
T09010
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsz
Trichothermofontia sichuanensis
Pathway
tsz03420
Nucleotide excision repair
tsz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OOK60_13820 (pcrA)
03430 Mismatch repair
OOK60_13820 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsz03400
]
OOK60_13820 (pcrA)
Enzymes [BR:
tsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OOK60_13820 (pcrA)
DNA repair and recombination proteins [BR:
tsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OOK60_13820 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
OOK60_13820 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
DUF1978
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UZQ53567
LinkDB
All DBs
Position
complement(3238734..3241163)
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AA seq
809 aa
AA seq
DB search
MSQVDFFHHLNPSQRRAVEHFCGPLLVVAGAGSGKTRALSYRIVNLVLTHRVAPENILAV
TFTNKAAREMKDRIETLFATQQAQARYGQPLSSLAPEVQTQLRSQVYRDITKDLWIGTFH
ALCARILRLDIEKYESAEGHRWERSFSIFDESDAQSLVKEIVKEKDLDDKKYDPRSLRFA
ISNAKNRDLSPRQFEQEQPNLRGRIIAEVYATYQERLAANNALDFDDLIWIPVQLFRQNE
SILGYWHHRFQHILVDEYQDTNRTQYELIKLLATNGDDPQRFDRQRRSIFVVGDADQSIY
SFRAADFKILMGFQDDFGDGLSDEETQTMIKLEENYRSTQNILEIANHLIEKNTERIDKV
LRPMRSSGEPVFCHRSDNEIDEAQFVINQMRDLQHQHPELNWGSFAILYRTNAQSRAFEE
VLVRSDIPYTIVGGLRFYDRKEIKDVLSYLKLLVNPYDTVSLMRVINTPRRGIGKSTLDR
LSTAAQELGVPVWEILSDETSVNTLAGRSAKSVNQFAATIRYWREQIDALPANQIIQGVL
EDSGYVQDLKAQGTQEAEERIQNVLELYNAVLQFEEENEDPSLLNFLASAALASDLDHLS
EGQTAVSLMTLHSSKGLEFPVVFLVGLEQGLFPSYRSLDDPAALEEERRLCYVGITRAQE
RLFITHARERRLWGAREVAVPSLFLGELPRELLSTNVPHAIPHYPTPRLSTTVAERATGY
RTPLPADPPRRETHPPAARSSTSPATSQATVSPETWMVGDYLIHKTFGHGQVTHVFGSGK
KMSIAVKFPHIGQKILDPNLAPLQRVNEA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagttgacttttttcatcatcttaatccttcgcaacgacgagcggttgagcat
ttttgtggcccgttattagtggtcgcgggggcaggttcggggaagacacgtgccctgtcc
taccggattgtcaatctggttctaactcatcgtgtggctccagaaaatatcctggcggtg
accttcaccaataaggctgcccgtgaaatgaaggaccggattgaaaccctgtttgcgacg
cagcaggcccaagctcgttacggtcagcccctatcttccctggcaccggaggtgcaaacc
cagttgcgatcgcaggtgtatcgcgacattactaaagatctgtggattggcaccttccac
gccctctgtgcccggattttgcggttggacattgagaagtacgaaagtgccgaggggcat
cgctgggagcgatcgttttcgatttttgatgagtcggacgcccaaagcctagtgaaggaa
atcgtcaaggaaaaggacttagacgataagaaatacgacccgcgatcgctgcggtttgct
atcagcaatgccaagaatcgggatctctccccgcgccaatttgagcaagaacagcccaat
ctgcgagggcggattattgctgaagtctatgcgacttatcaggaacgtttagcggccaac
aatgccctggattttgatgatctgatttggattccggtccaactgtttcgtcaaaatgag
tcgattctgggctactggcaccatcgttttcagcacattctggttgatgaatatcaggac
acgaaccgcacccaatatgaactgattaagctattggcaacgaatggggatgatccccag
cgtttcgatcgccaacgacgatcgatttttgtggtaggggatgcggatcaatcgatttac
tcgtttagggcggctgattttaagatcctcatgggttttcaggatgactttggggatggg
ttatctgacgaggaaacccaaacgatgattaagctggaagaaaactatcgttctacccaa
aacattcttgaaattgccaaccatttaattgagaagaatacggaacgcattgataaggtc
ctccgtcccatgcgcagttcgggagagccggtcttttgccatcgatcggataacgagatc
gacgaggcccagtttgtcatcaatcaaatgcgggatctccaacatcagcatccggagttg
aattggggcagttttgccatcctctaccgcaccaatgcccaatctcgtgcctttgaagaa
gtcctggtgcgatcggatattccctatacgatcgtgggggggttgcggttctacgatcgc
aaggaaattaaggatgtgttgagctacctgaaactcctggtgaatccctacgataccgtg
agcttgatgcgggtgattaataccccccggcgcgggatcggtaagtcaaccctcgatcgc
ctcagcaccgctgcccaggagttgggagtgcctgtttgggaaattctcagtgatgagact
tccgtgaatacgctagcagggcgatcggctaaatcggtcaatcagtttgccgcaacgatt
cgctattggcgggaacagatcgatgccttgcctgctaaccaaatcatccagggggttttg
gaagattcgggttatgtacaagacctgaaggcccaggggacccaagaggcggaagaacgc
atccagaacgtgttggaactctataatgctgtcctacaatttgaagaggaaaacgaagat
ccgagcttgctcaatttcctagcgagtgcggctctcgcgtcggatttagatcatctgagt
gaaggtcaaacggcggtttccctgatgacgctccattcgtcgaaaggactggaattcccg
gtggtttttctcgttgggttggaacaggggttattccccagctatcgatcgctcgatgat
cccgcggctttggaggaggaacggcgcctctgttatgtggggattacccgtgcccaggag
cgcttatttattacccatgcccgggaacgccgcctgtggggtgctcgtgaggtagcggtt
ccttcactgtttttgggagaactgccgcgcgagttattgagcactaacgttccccatgca
atcccccattatcccaccccacggctgagcaccacggtggccgagcgcgccactggctac
cggacaccgctcccagccgatcccccacgccgcgagacccatccgccggcagctcggtct
tcaacgagtcctgccaccagtcaggccacggtttcacccgaaacttggatggtgggggat
tatctgattcacaagacctttggtcacggccaagtcacccatgtctttggcagtggtaaa
aaaatgtcgatcgccgtcaaatttccccatatcggtcaaaaaattctcgaccccaatctt
gcgcccttacaacgggttaatgaagcctga
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