Trichothermofontia sichuanensis: OOK60_14885
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Entry
OOK60_14885 CDS
T09010
Symbol
sigC
Name
(GenBank) RNA polymerase sigma factor SigC
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsz03021
]
OOK60_14885 (sigC)
Transcription machinery [BR:
tsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OOK60_14885 (sigC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
LexA_DNA_bind
Phage_terminase
GerE
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
UZQ53768
LinkDB
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Position
complement(3507229..3508416)
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AA seq
395 aa
AA seq
DB search
MYQEGDDMAAVMAETLDELDPTAAELGGLPNHASRRTTDLVRLYLQEIGRVGLLGREEEV
AEAQKVQHYIHLVERRNQAAAEGNAILYQYVELYRIHDALTAYLGYRPSLERWADEANLP
IADLKAILTAGKQAWAELVGLSVARLERVLSEGMRAKEHMIKANLRLVVSVAKKYQNRGL
ELLDLIQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATQSRAIRLPVHITEK
LNRIKKAQRKLSQEKGHTASIEDIAKELEMTPPQVREVLLRVPRAVSLETKVGKDRDTEL
GDLLETDALSPEESLMQDALRNDLLQLMSDLTSRERDVIQMRFGLGDGHPYSLAEIGRAL
DLSRERVRQIEAKALQKLRQPKRRNLIKDYLEAFS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaagaaggtgacgacatggcagcagtgatggcagaaactctcgatgagctagac
ccaacggcagcagagttgggtgggctgcccaatcacgcttcgcgacggacgactgatttg
gttcgcttgtacctgcaagaaattggccgggtgggtctgttaggccgggaagaggaagtc
gccgaagctcaaaaggtccaacactatatccacctggttgaacgccgcaatcaggcagcg
gcagaggggaatgcgatcctgtatcagtatgtggaattgtaccgcatccacgatgccctg
acggcttacctggggtatcgcccatccctcgaacgctgggcggacgaagccaatttgccg
atcgccgatctcaaggccatcctgacggcaggtaagcaagcctgggctgaactcgtggga
ttatcggtggcccgattagaacgggtgctgtcggaggggatgcgggccaaagagcacatg
atcaaagccaacctgcggctagtggtttcggtggcgaagaagtatcaaaaccgagggctt
gaactcctggatctgattcaggaaggaacgctgggtctcgaacgagccgttgaaaaattt
gatccgacgaaagggtatcgctttagtacctatgcttactggtggattcgccagggaatc
acgcgggcgatcgcgacccaaagtcgggcgattcgtctgcccgtgcatattacggaaaag
cttaatcgcattaaaaaagcccaacgcaagctttcccaggaaaaagggcataccgcctcg
attgaggatattgccaaggaactggaaatgactccaccccaggtgcgagaagtcctgctg
cgggttccccgtgctgtgtcgctggaaaccaaagtgggcaaggatcgggatacggaactg
ggggatttactcgaaactgatgccctctccccagaagaatccctgatgcaggatgctctc
cgcaacgatctgctgcaactgatgtctgacctcaccagccgcgaacgggatgtgatccag
atgcgctttggcttaggcgatggccatccctattccttggcggaaattggccgggcgttg
gatctctcacgggagcgggtacgccagattgaagccaaggccctgcaaaaactccgccaa
cccaagcgccgcaatttgatcaaagattatttggaagcgttctcgtag
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