Trichothermofontia sichuanensis: OOK60_16610
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Entry
OOK60_16610 CDS
T09010
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
tsz
Trichothermofontia sichuanensis
Pathway
tsz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OOK60_16610 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tsz03011
]
OOK60_16610 (rpsD)
Ribosome [BR:
tsz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OOK60_16610 (rpsD)
Bacteria
OOK60_16610 (rpsD)
Archaea
OOK60_16610 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
BpuSI_N
Motif
Other DBs
NCBI-ProteinID:
UZQ54088
LinkDB
All DBs
Position
3927892..3928500
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AA seq
202 aa
AA seq
DB search
MSRYRGPRLRIVRRLGELPGLTRKSPRRAYPPGQHGQTRKKKSEYAIRLEEKQKLRYNYG
LSERQLLRYVRKARRATGSTGLVLLQLLEMRLDNTVFRLGMAPTIPSARQLVNHGHVCVN
GHVVDIPSYNCKPGDVITVRDRDASRKLVQQNLEYPGLSNLPSHLEFDKNTMVGKVNSVI
EREWVALTINELLVVEYYSRKG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctaccgaggtccccgcctccgcatcgtgcgccgtctcggagaactacctggt
ctcacccgtaagtccccgcggcgtgcctatccccccggtcaacacggccaaacgcgcaag
aaaaagtctgaatatgccatccggctggaagaaaagcagaagctgcgctacaactacggc
ttatcggagcggcaactgttgcgctatgtacgcaaggcccgacgagcaacggggtctacg
gggttagtgttgctgcaactgctggaaatgcggctggacaacacagtattccgtttgggt
atggctccaacgattccttcagcgcgccaactggtcaaccacggccatgtctgtgtcaat
ggacacgtggtggatattcccagctataactgcaaaccaggggatgtgattacggtgcgc
gatcgcgacgcttcccgcaagttagtccaacaaaatttggaatatcccggtttgtccaat
cttcccagtcacctggaatttgacaagaacacgatggtagggaaggtcaacagcgtgatt
gagcgggaatgggtggccttaacgattaatgaactgctggtggttgagtactactcacgc
aagggctaa
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