Trichothermofontia sichuanensis: OOK60_17935
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Entry
OOK60_17935 CDS
T09010
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tsz
Trichothermofontia sichuanensis
Pathway
tsz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OOK60_17935 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsz01007
]
OOK60_17935 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsz03016
]
OOK60_17935 (lysS)
Enzymes [BR:
tsz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
OOK60_17935 (lysS)
Amino acid related enzymes [BR:
tsz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OOK60_17935 (lysS)
Transfer RNA biogenesis [BR:
tsz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OOK60_17935 (lysS)
Prokaryotic type
Other AARSs
OOK60_17935 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Thiamine_BP
Motif
Other DBs
NCBI-ProteinID:
UZQ54331
LinkDB
All DBs
Position
complement(4216976..4218544)
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AA seq
522 aa
AA seq
DB search
MSDERATTPSAHRPTDSHSNREDQRAVRLDKVDQLKQLGINPYAYRWEVSHHAAPLQEKF
ADLPAGEGVDLTVTIAGRIMARRVFGKLAFFTLQDETGTIQLYLEKQTIQAGMATIDPDA
FTHLKQLTDVGDILGVKGTIKRTEKGELSVMVSEYAILTKSLLPLPDKWHGLTDIAKRYR
QRYVDLFINPDVRESFRRRAKITAAIRRYLEDQGFLEIETPVLQVEAGGAEARPFTTYHN
TLDMPLYLRIATELHLKRLVVGGFEKVFELGRVFRNEGISTKHNPEFTTIEIYQAYADYY
DMMALAETLIAHVAQEVLGTLKIDYQGTMIDLTPPWRRVTMHDIVQEVTGLDFRQFTAVE
AARAAAEQAGIPGIEDCETIGHLLNEAFEQKVEDTLIQPTFVIDYPVEISPLAKPHRTQA
GLVERFELFIVGRETANSFSELTDPIDQRQRLEAQAARKAAGDLEAHSVDDDFLTALEYG
MPPTGGLGIGIDRLVMLLTNAPSIRDVIAFPLLKPEKSETDG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaacgcgcgacaacgccctctgcccaccgcccgactgactcccactccaac
cgcgaagaccagcgggccgttcgcctcgacaaggtggaccaactcaagcaattgggcatt
aacccctacgcctatcgctgggaggtgagccaccacgcggctccgctgcaagagaaattc
gcggatttgcctgccggggaaggcgtcgatctcaccgtaacgatcgcgggacggattatg
gcccgtcgggtgtttggcaaattggccttcttcaccctgcaagacgaaaccggcacgatc
caactttatctggagaagcaaacaatccaagccggtatggccacgatcgaccccgatgca
tttacccatctcaaacagttaaccgacgtgggcgatatcctgggtgtcaagggcacgatt
aaacgcactgaaaagggcgaactctccgtcatggtgagcgaatacgccatcctgaccaaa
tccctgctacccctccccgacaagtggcatggtcttactgatattgccaagcgctatcgt
caacgctacgtcgatctcttcatcaaccctgatgtacgcgagagcttccggcggcgggcc
aaaattacggcagccattcgtcgctatctggaagaccagggctttttggagattgaaacc
ccggtcctccaggttgaagcggggggagccgaggcccgtcccttcaccacgtaccacaat
acgctcgatatgcccctctacctgcggattgccacggaactgcacctgaagcggttagtt
gtcggcgggtttgaaaaggtatttgagctgggacgcgtcttccggaatgaggggatctcg
actaagcataatcccgagttcacgacgatcgagatttatcaagcctatgccgattactac
gacatgatggccctggcggaaaccttgatcgcccatgtggcccaggaagttctgggaacg
ctcaaaattgattaccaaggcaccatgatcgacctcactcccccctggcgacgggtgaca
atgcacgatattgtgcaggaagtcacggggttagattttcgccagttcactgccgttgaa
gctgcccgtgctgccgccgagcaggctggaattccgggaattgaggactgcgaaacgatc
ggtcacctgctcaacgaagcctttgaacaaaaggttgaggacaccctgatccaacccacg
tttgtgattgactacccagtggaaatctcgcccttggcgaagccccatcgcactcaagca
ggtttagtggagcggtttgagctgtttatcgtagggcgggagacagccaatagtttttcg
gaactgaccgatcccattgaccagcggcaacggctggaggcccaagccgcccgcaaggca
gccggggatttggaagcccacagcgttgatgatgattttctgacggcgttggaatatggg
atgccaccaacgggcggcttaggaattggcattgatcgcctcgtcatgctgctgaccaac
gcccccagcattcgcgacgtgattgccttccccctccttaaaccagaaaaatcggaaacg
gatggctga
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