Trichothermofontia sichuanensis: OOK60_18165
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Entry
OOK60_18165 CDS
T09010
Symbol
grpE
Name
(GenBank) nucleotide exchange factor GrpE
KO
K02652
type IV pilus assembly protein PilB
Organism
tsz
Trichothermofontia sichuanensis
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tsz02044
]
OOK60_18165 (grpE)
02035 Bacterial motility proteins [BR:
tsz02035
]
OOK60_18165 (grpE)
Secretion system [BR:
tsz02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
OOK60_18165 (grpE)
Bacterial motility proteins [BR:
tsz02035
]
Pilus system
Pilus assembly proteins
OOK60_18165 (grpE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
GrpE
MshEN
AAA_16
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UZQ54371
LinkDB
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Position
4270891..4273899
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AA seq
1002 aa
AA seq
DB search
MPRVNRRGFFQLGCPDYYAILGIPIQSSPIAIQARGTQLSRSLEAGANQAPPERRPLIEQ
WLRQALTPALTYLSQDADRRACLAQLWRTAQQSYQRVPEQILVSEAAQHLLQVEDGEVAR
FYRYFVTQIRKRQYQQFSRIWEFTGQLSELNLAYLWRLIQRQQATTAPSVSKPNSPAVAP
EYPLTPFCYRALQTGYANRVQIQQALAQYQQYQSNRPGSSQAAHPSLPLILAAIVGHPLP
VTLSRDYEQLQRFEHSLYYGVPWVDPDRLPLSPPACPPHETLARIAQLVTTYCDLETCQQ
YRCLPLAEVGRGASPPENRQLIVGMVHPDDTAAYQAIAERVSSHAVILQRMGLLAADFEQ
LWQGVSDLLSAASVPVLSTETLTTQVGRTPTLSGQAETASETQSESSQAAAIPPKRQSSS
GLPIEAIIPTILERAIAEQASEIHIEPQANNLRVRFRLQGILKERIPPLAPQLIPTITAC
CKSMADLEVGTHTLPQQGRFQQTLQGREIDFLVNTVPSRYGEKIVLRVLDPQAIADLETH
VGDPSLLWQIRDLISYPTGLLLVSGPRSSGKSTTLFSILAERNQAGLSITTVEDPIAYRL
AGITQTEVNPAKNLDFKASIQAALAQQPDVLVVSDIRDAEVAAAVFEASQRCLVLSTLAA
EGTVDTIAELMRLAVDPGTLTRSLRGIIHQRLVRLVCPACRIPYQPTRDDVAQYGLGIDD
VAQVTFYRAASLTSPFTATEIGAASAHVCSSCQGTGYQGRRALFEILLMTDDIRALLLQN
GSLHEVKRLALCQGMIPLWSQALTLAYQGKVALDVLGNIPFDGTMLAYVTSVPSPTTRGT
IPQPAPAYAEIIPEGDTYAPQMAPVHETKLAESAPQAAPAVEQAKYRKQGQEEVLLALIE
MFEAFEYAKSLTRTSSPGEMAIQRGYQQIFDRLITRLSAFGFEPTAFVGTAFDPHLHEAI
AVETTDRFPHRTILEVQQQGYAIGPKVLRLAQVKVAIAPNAE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagtcaacaggcggggatttttccagctagggtgtccagattactacgccatt
ctgggaatcccgatccagtccagcccaatagccattcaggcgcggggtactcagttgagc
cgctccctggaagctggggctaaccaagctccgcccgagcgtcgtccactcattgaacaa
tggttacgacaggctttaaccccagccctaacctacttgagccaggatgccgatcgccga
gcctgtcttgcccaactctggcgcactgcccagcagtcctatcaacgggttccggaacaa
atcctggttagtgaagctgcgcaacacctgctccaggtggaggacggggaagtagccagg
ttttatcgctattttgtgacccagatccggaagaggcaataccaacagttctctcggatt
tgggaattcacggggcaactcagtgaactcaatctggcctatctatggcgactcatccaa
cgccaacaggcgacaaccgctccctctgtctccaagccgaatagcccagcggtggctcca
gaatatcccctcactcctttttgctatcgagcactccagacgggctatgcaaaccgagta
cagattcaacaggcactggcgcaataccaacaataccaatcgaatcgcccagggtcttcc
caggcggctcacccgtccctcccgctgatcttggcggcgatcgtggggcaccctttgccc
gttactctgtctcgggattatgagcagttacaacgctttgagcacagcctgtactatggg
gtgccctgggtagaccccgatcgcttacccctcagcccaccggcttgtcctccccacgaa
accctggcccgcattgcccaattggtcacgacctactgtgatctggaaacctgtcagcaa
taccgttgcttgccactggcagaggtcgggcgcggagcgtcgccgccggagaatcgccag
ttgatcgtggggatggtgcatcccgatgatacggcggcatatcaagcgatcgccgagcgg
gtgtcctcccatgccgttatcctgcaacggatggggcttttggcagccgactttgagcag
ttgtggcaaggggtatccgatctcctgagtgcggcgtcggtccccgtcctatcgacagaa
accctcacaactcaggtcgggagaacgcctacccttagcgggcaggcggagacagcctct
gagacgcagtccgaaagttctcaggcggctgccatcccccctaagcgccagtcctcttct
ggtttgcctatcgaagcgatcatcccgacaattttagagcgggcgatcgccgagcaggca
tcagagatccacattgaacctcaggcgaataacctgcgggtacggttccgccttcagggc
atcctgaaggagcgcatccccccgctcgccccccaactgattccgacgattacggcctgt
tgtaaaagcatggcggacctggaagtgggtacccacaccctgccccagcaggggcgcttc
cagcaaaccttgcaagggcgggagattgattttttagtcaatacggtgcccagtcgctat
ggcgagaagattgtcttgcgggtgcttgatccccaagcgatcgctgatttggaaacccat
gtgggggatccttccctcctatggcaaatccgggacctgattagttaccccaccgggttg
ctgctggtttctggcccccgcagttcgggcaaatcgacgaccttgttcagcatcctggcg
gaacggaatcaggcaggattgagtattacgacggtggaagatccgatcgcctatcggctg
gcgggcattacccaaaccgaggtcaacccggccaagaacctggacttcaaggccagtatc
caggcagcccttgcccaacagcccgacgtgttggtggtgagtgatattcgcgatgcggag
gtggcagcagcagtgtttgaagcctcccagcgctgtctggtcctgtcaaccctagcggcg
gaggggacggtggatacgatcgcagaactgatgcgcctggcagttgaccctgggacgctg
acgcgatcgctgcgggggatcatccatcagcgcctggtccggctggtgtgtccggcctgc
cgtatcccctaccaacctacccgcgatgacgtggcccagtatggcttggggatagatgat
gttgcccaggtcaccttttatcgagccgcctcccttacctccccctttaccgccactgag
attggggcggccagtgcccatgtgtgttcctcctgccaggggacaggctaccaggggcgg
cgggccttgttcgagatcctattgatgacggacgatatccgggcactgctattacagaat
ggttccctccatgaggtgaagcgccttgccctatgccagggaatgattccactttggagc
caagccctcaccctagcctaccaggggaaagtcgccctggatgttctggggaatatcccc
tttgatggcacgatgctggcctatgttacctctgtgccgtcacccactacccgtgggacg
attccccaacccgcccctgcctatgctgagatcattccagagggggatacttatgctccc
cagatggccccagtgcacgaaaccaaactggcggaaagtgcaccccaggcggctcccgcg
gtggagcaggccaaatatcgcaaacagggtcaggaggaggtgttattggccctgattgaa
atgtttgaagcgtttgaatatgctaaatcgttgacccgaacgagtagcccaggtgaaatg
gccattcagcggggctatcaacagattttcgatcgcttgattacccgtctaagcgctttt
ggttttgaaccgaccgcctttgtggggacagcgtttgacccgcatctgcatgaggcgatc
gccgttgaaacgacggatcggttcccccatcgcaccattctggaagtccaacaacagggg
tatgcgatcggtcccaaagtattacgtcttgcccaggttaaggtggcgatcgcgcctaac
gctgagtag
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