Trichothermofontia sichuanensis: OOK60_18885
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Entry
OOK60_18885 CDS
T09010
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tsz
Trichothermofontia sichuanensis
Pathway
tsz03030
DNA replication
tsz03430
Mismatch repair
tsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOK60_18885
03430 Mismatch repair
OOK60_18885
03440 Homologous recombination
OOK60_18885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsz03032
]
OOK60_18885
03400 DNA repair and recombination proteins [BR:
tsz03400
]
OOK60_18885
Enzymes [BR:
tsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOK60_18885
DNA replication proteins [BR:
tsz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OOK60_18885
DNA repair and recombination proteins [BR:
tsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OOK60_18885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
AAA_30
AAA_19
RuvB_N
TIP49
AAA_5
AAA_16
AAA_18
Herpes_Helicase
Rad17
AAA_24
AAA_14
AAA_28
PIF1
AAA_2
Motif
Other DBs
NCBI-ProteinID:
UZQ56414
LinkDB
All DBs
Position
4430917..4433061
Genome browser
AA seq
714 aa
AA seq
DB search
MTYEPLHHKYRPQTFADLVGQTAIATTLANAISQEKIAPAYLFTGPRGTGKTSSARILAK
SLNCLASDRPTAQPCGVCEACSSITRGTALDVTEIDAASNTGVDNIRELIERAQFAPVQC
RYKVYVIDECHMLSTAAFNALLKTLEEPPAHVVFVLATTDPQRVLPTIISRCQRFDFRRI
PLDAMVAHLQKIAAIEGIDITVEALTLVGQIAQGGLRDAESLLDQLSLAVGQITADRVWD
LVGAVPERDLLVLLQAIAANDPIAVIDCTRQLLDRGREPLTVLQNLASFYRDLLIAKTAP
DRRDLVALTEPTWTQLVVLARSWDTHLILQSQQQLRSGEAQLKHSTQPRLWLEVILVGIL
PTVLLPPTTAGATAVPVPVPPQPQLPSPAIAASPTGHSPTVTATPSPALSLFSVAPLPPL
AAPPAVSAPASSPAPTVPNSFPPRPQPEPASLVGPPVPPAPGLVPPACTTTQNLKAIWSQ
VLPQIQQTSTRVMLSQWGQLLQIDQNGVRLGIPPKLKSNLEASLAIVAAAFEHVLHRPVQ
IRIEGVTRREPDPDGTDSATDLGLSTAPPPPPSAIPLRVAPPSPIPPAVPALSPTSASPT
RSHSPQPHPNSSRSPGQETPPATSSAASYNDGIRHGHTAAPVITDWVDPQPLPSIAAPEL
GPPPATDWQVSEVTQAAKRLAEFFNGKVVDLDATEDIAMDFNDAIDPDFEDLDE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgacctacgaacccctgcatcacaaataccgtccccaaacctttgctgatctggtgggc
caaaccgcgatcgcgacgacgctggccaatgcgatcagccaagaaaaaatcgccccggcc
tatttgttcacaggaccacggggaacggggaaaacgtcgagtgcccgcattctggccaag
tcgttgaattgtctggccagtgatcgacccacggctcagccctgcggcgtatgtgaggcg
tgtagctcaattacacggggaacggccctagatgtgacggaaatcgacgcggccagtaat
acgggggtagacaatatccgtgagttgatcgaacgtgcccagtttgcgccggtgcagtgt
cgctataaggtctatgtgatcgacgagtgccacatgttgagtacagcagcctttaatgcc
ctgctcaaaaccctggaagaaccccccgctcacgtggtttttgtcctggccactaccgat
ccccagcgggtcctgcccaccattatttcccgctgccaacgctttgactttcgccgcatt
ccgctggatgcaatggtagcccatctccagaaaattgcggcgatcgagggtattgatatt
accgtagaagcgctgacactggtgggccagattgcccaggggggcttacgggatgccgaa
agtttgctggatcaactgagtctggccgtgggccaaattacggctgatcgcgtctgggat
ctggtgggggctgtccccgaacgggatttattagtcctcctgcaggcgatcgcggctaat
gatccgatcgcggtaattgactgtacccgtcaactcctcgatcggggccgggaaccccta
actgttttgcaaaatctggccagtttttatcgcgatctgttgatcgccaaaactgccccc
gatcgccgggatttggtggccctgacggaaccaacctggacccaactggtggtcttggcg
cgatcgtgggatacccatttgattctacaaagccaacaacagttacgcagtggcgaagcc
caactcaagcattccactcagccccgcctctggctcgaagttatcctggttggtattctt
ccgactgtccttcttcccccaactaccgctggagccacagccgttcctgttcctgtcccc
ccgcaaccccaactgccatccccggcgatcgctgcatcacccacgggacattcccccacc
gtgaccgccactccgtcgcctgctctatcacttttctccgtagcaccgctcccacccctg
gcagcgccccccgctgtctctgcccctgcctcctcacctgcccccactgtccctaacagt
ttcccacctcgtccccaaccagaacccgcatccctggtgggaccacccgtgccacctgct
cccggattggttcccccagcttgcacaacgactcaaaatctcaaagcaatctggtcccaa
gtgctgccacaaattcagcaaaccagtaccagagtcatgctgagccaatggggacaactg
ctccagatcgatcaaaatggggtgcgcttaggcattcccccaaagctgaaatccaattta
gaggcgagtctcgcgatcgtagcagcagcctttgagcacgttctccatcgccctgtccag
atccggattgaaggggtaacccgccgtgaacctgatcctgatggcaccgatagcgcgacc
gatttaggtttgtccaccgcaccccccccgccgccgagtgcaattcccctcagggttgcc
ccaccctcgccaatcccgccagcggtcccagccctttccccaacgtctgcctcacctacc
cgcagtcatagcccccagccccaccctaacagcagtcgcagccctggccaagagactcca
ccagcaaccagtagcgcagctagctataacgacggcattcggcatgggcatacggctgcg
ccagtcattactgactgggtagatcctcaacccttaccaagcatagcggccccggaactt
ggcccacctccggcgacagactggcaggtgagcgaagtcacccaagcagccaaacggctt
gcggaatttttcaatggcaaagttgtcgatctggacgccacagaggacatcgcgatggac
ttcaacgacgcgatcgaccccgactttgaagatctcgacgaataa
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