Pseudothermotoga thermarum: Theth_0204
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Entry
Theth_0204 CDS
T01554
Name
(GenBank) DNA polymerase III catalytic subunit, PolC type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tta
Pseudothermotoga thermarum
Pathway
tta03030
DNA replication
tta03430
Mismatch repair
tta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Theth_0204
03430 Mismatch repair
Theth_0204
03440 Homologous recombination
Theth_0204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tta03032
]
Theth_0204
03400 DNA repair and recombination proteins [BR:
tta03400
]
Theth_0204
Enzymes [BR:
tta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Theth_0204
DNA replication proteins [BR:
tta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Theth_0204
DNA repair and recombination proteins [BR:
tta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Theth_0204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
HHH_3
tRNA_anti-codon
RNase_H_2
DUF655
DEDDh_C
tRNA_anti_2
DNA_pol_A_exo1
YhfH
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AEH50306
UniProt:
F7YV22
LinkDB
All DBs
Position
complement(207772..211896)
Genome browser
AA seq
1374 aa
AA seq
DB search
MKTTLIENLNLNVREFAKNVGIEIESDGTIESAYFDWTTNTLVLKANGLGAEVDLLQSWL
RQFLETDVKLIRTDALISLDDIAKELNGTFPYIQSVLLHGDKVVMKVTSEFGKERVESKK
PLIRSYIRQKLSIEDIEIVVEEPKIETKIETVKPNLQIVGSSTRVEKEKVEIKESDFLTP
STITTQQGTVKVKGQIFKMEIRGGKKKVLAVCITDKKDSLLCLAFNSVAEKMQAELSEKD
CVILEGDLKFEEDEPILYVKEYKKAEPWIRMDESEVKRVELHAHSKFSDLDSVLDISSYV
ERAKLWGWKAIAITDHGVVQAIPQFYEACKNAGIKPIFGVEAYVVNDSEPIMYNPRDFDI
SKATYVVVDLETTGLHPMFSEIIEIGAVKIEEGQITDEFHTLVKPKEKLSDFTSYLTGIK
QEDLENMPTIEEVLPKFLDFCKDSILVAHNASFDYRFLRYWIRKLTGQDWNVTFVDTLAL
SKRLVKLSGYNLEKLAAHFKMGSFSHHRALEDAKVTAKIFLELLKLVEKKSFKTFSEIEI
SQKEIVVRQSKPFHATILVQNKEGLKNLYKLISDAHIKYFHSVPRIPKSDLQALRAGLLI
GSACVSGEVIQELLSGADMSEIEQTISFYDFIEIMPLDLLPEDNDLGLTRERLKEVYLKL
FEIAEKMNIPIVMTGDVHFLDPEDSKVRDALEAPQKDKLTQQPAAYLRTTNEMMQAAMEI
FQDESKARKVVIDYPNQIADSIEMVVPLEKKLHPPKIEEADEQIKTLAIQRAKELYGEPL
PELIQKRLEKELNAIINHGYAVLYLIAKKMVDKSLSDGYVVGSRGSVGSSLVAYLLGITE
VNPLPPHYFCNQCKYVEFVENSSYGSGYDLPRKKCPKCGNELSRNGQDIPFETFMGFEGD
KVPDIDLNFSGEYQDEAHRFIETLFGKSHVYRAGTINTIASKTAYGFVKNYEEKINQKLR
KAEVERLVNELMGVKRTTGQHPGGLIIVPKEYEVYDFTPIQYPANVKTAETFTTHFDYEA
IHEDLVKIDALGHDDPTFIRLLKEFTGIDPMTIPMDDPDTLKIFSSLEPLKIDPKELGMD
VGTLGIPEFGTQFVRGMLSETRPKTFAELVRISGLSHGTDVWLNNAKDWIEQGKATLSEV
ISCRDDIMNYLIKKGMEASKAFKIMENVRKGKGLSEEEEKNLRELKVPEWFIESCKRIKY
LFPKAHAAAYVSMAFRIAYFKVHYPLAFYAAYFTLKGDEFDIDAALGGIKVVRERLQEKA
KSTKKDVREKSEETNLEVMLEMFLRGISFLPVNIKKSHSKLFLIEDGKLRIPFNKLPGLG
NNVAESIVKAREEKPFTSIEDLIARTKVNKAHLEVIRKYVELENLPEKEQMGLF
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccacgttgatcgaaaatttgaacttgaacgtgagagagtttgcaaaaaatgtt
gggattgaaattgaatccgatggcactatagagtcagcttattttgattggacaaccaac
acgttggttttaaaagccaacggtttgggcgccgaagttgatcttttgcagtcttggctt
aggcaatttttagaaactgacgttaagctgattcgaaccgatgctttgataagccttgac
gatatagcaaaagaattaaacggaacctttccatacatacaaagcgttttgctccacgga
gataaagtcgtgatgaaagttacctcggaatttggtaaagaaagagtggaaagcaaaaag
cctcttataagaagctacatccggcaaaaactgagtattgaagatatagaaattgtggtt
gaagaaccgaagatagaaacaaaaatagaaactgtaaaacccaatctacaaattgttgga
agttcaaccagggttgagaaagaaaaagttgaaataaaagaaagcgactttttgacacct
tcaacgataaccactcagcagggaacagtcaaagtaaaaggtcaaatctttaagatggag
attagaggtggaaagaaaaaagttctggcagtctgtatcaccgataaaaaagactccttg
ctttgtttggcgttcaacagcgttgctgaaaaaatgcaagcagaactttcagaaaaagat
tgcgtcattttagagggagacttgaaatttgaagaagacgaaccgattctgtacgttaag
gaatacaaaaaggcagaaccttggatcaggatggatgaatcagaagttaaaagggttgaa
ttacacgctcacagcaagtttagcgatcttgacagcgttcttgatataagcagctacgtt
gaacgtgcaaaactttggggatggaaagccatcgccataactgaccatggagttgttcag
gcgataccgcagttctacgaagcttgtaaaaatgctggaataaaacctatcttcggtgta
gaagcttacgtcgtaaacgattcggaacccataatgtacaacccaagagatttcgatata
tccaaagccacttacgtggttgttgacctggaaaccacaggtttgcaccctatgttttcg
gagatcatagaaattggtgctgtgaagattgaagaaggccaaataaccgacgaatttcac
actttggtcaaaccaaaagaaaaactaagcgatttcacttcgtacttaactggtataaaa
caagaagacctcgaaaacatgccaacaatagaagaagttcttccgaagtttttggatttc
tgcaaagattccattttggttgcccacaacgcttcttttgattatcgctttttgcgttat
tggataagaaaactcacaggtcaagattggaacgttacttttgtggacacgcttgcactt
tcaaaaaggttggtaaagctttctggctacaaccttgaaaaattggcagctcacttcaag
atggggtctttctcgcaccacagggctttggaggacgcaaaagttactgcgaaaattttc
cttgaacttttgaagcttgtggagaaaaaatctttcaagactttctccgaaattgaaata
agtcaaaaggaaatagttgtaagacagtcaaaaccattccacgcaacgatactggttcaa
aacaaagaaggtcttaaaaacctttacaaactcatatctgatgcacacattaaatatttc
cacagtgtgccaagaattccaaagagtgaccttcaagctctgagggctggactacttatc
ggaagcgcctgtgtttctggggaagtgattcaggaacttttgtccggtgctgatatgtca
gagatagagcaaaccatttccttttacgatttcatcgaaataatgccgttggatctttta
cctgaagacaacgatcttggactaacccgtgaaagactcaaagaagtgtacttgaaactc
tttgaaatagctgaaaagatgaacatacctatcgtcatgactggagatgttcatttcctt
gatcctgaggattcaaaagtcagagacgctttggaagcaccacagaaagacaaattaact
caacaacctgctgcttaccttcgcacaaccaacgagatgatgcaagctgctatggaaatc
ttccaggatgaaagcaaagcgaggaaagttgtgatcgattatccaaatcagattgccgac
agtatagaaatggtcgtacctcttgagaaaaaacttcacccaccaaaaattgaagaggct
gatgaacaaataaaaactcttgcaattcagagagccaaagaactttacggtgaaccttta
cctgaacttatccaaaaaagacttgaaaaagagttgaacgcaatcataaaccacggttat
gcggtcttgtatttgatagccaaaaaaatggttgacaaatctctcagcgatggatacgta
gttggttcaagaggatcggttggatcttctttggttgcatatctgcttggtatcaccgag
gttaacccacttccaccacattatttctgcaatcaatgcaaatacgtcgaatttgttgaa
aactcatcctatggaagtggatatgatcttccaaggaaaaagtgtccaaaatgcggcaat
gaactttcacgaaatggtcaagacataccgtttgaaacctttatggggtttgagggtgat
aaggttcctgacatagatttgaacttttctggagaataccaagatgaagcacatcgattc
atagaaacactctttggaaaatcccacgtttatcgtgcaggtaccataaacaccatagct
tcgaaaactgcgtacggttttgtcaaaaattacgaagaaaaaatcaatcaaaaacttaga
aaagccgaagtggaaagattagtcaacgaactgatgggagtaaaaagaaccacaggacaa
catccaggcggtttgataatcgttccgaaagagtacgaggtatatgactttacaccaata
caatatcctgcaaacgttaaaacggcagaaactttcacaacgcactttgactatgaggca
atccatgaggatcttgtgaaaatcgacgcacttggacatgatgaccccactttcataagg
cttctaaaagagttcactggaatcgacccaatgacgattccaatggatgatcctgacact
ttgaaaattttctcttcacttgagcctttgaaaatcgatccaaaggaacttggtatggat
gttggaacccttggaataccagaatttggtacacagtttgtacgcggaatgctctcggaa
acaagaccgaaaacctttgctgaacttgttaggatctctggtttgtcacacggtacagac
gtttggttgaacaacgcaaaagattggattgaacaaggaaaagcaacactttcggaagtt
atttcttgtagagacgacataatgaattatttgatcaaaaaaggaatggaagcttccaag
gctttcaagataatggaaaacgtacgaaaaggaaaagggctgagcgaggaagaggaaaag
aatcttcgagaactcaaagttccagaatggttcatagaatcctgtaaaaggatcaaatac
cttttcccgaaagctcacgcagcagcatacgtcagcatggctttcagaatagcttacttt
aaggtgcactatcctcttgcattctacgcggcgtactttactttgaaaggagacgagttt
gacatcgacgcggctttgggtggtataaaagttgtcagagaaaggcttcaggaaaaggca
aaatctacaaagaaagatgtgcgtgaaaaatccgaagaaacaaaccttgaggtcatgctc
gaaatgttcttgagaggtatatccttcctacctgtgaacatcaaaaaatctcattccaag
ttgttcttgatagaagatggcaaacttagaataccgtttaacaagctgccaggccttggt
aacaacgtcgcagaatccatcgtaaaagcaagagaagaaaaaccattcacttccatagaa
gacctgattgcaagaactaaagttaacaaagctcatttggaagtcataagaaagtacgtc
gagcttgaaaatctaccggagaaagaacaaatgggactcttctag
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