Pseudothermotoga thermarum: Theth_0243
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Entry
Theth_0243 CDS
T01554
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tta
Pseudothermotoga thermarum
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tta03019
]
Theth_0243
Messenger RNA biogenesis [BR:
tta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Theth_0243
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
HDOD
TraI_2
Cas3_HD
WipA_N
Motif
Other DBs
NCBI-ProteinID:
AEH50343
UniProt:
F7YV44
LinkDB
All DBs
Position
complement(249879..250931)
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AA seq
350 aa
AA seq
DB search
MQLGDKMPKELVQKVVSSSLEKFPLLSDIMKKLNENVEVVAKISSKRLQETKDQKKLLLL
TLVDRSGSLRAVDWHNAEENFEKLSEGDVILAKGRIVYFEDHLQLNLDKSKDSVRVMQEE
EYDIERFVETTPEDIEKLQRKLKELIDDIQDKEIRNLLKELFEKDEQFFSKFIKVPAGVS
VHHTYIGGLLEHTVAVASICKKIWSVYENALNKDLLIAGAILHDIGKVQEYTITKKGFEV
TTEGELKSHIALGVEILQSKAKNVQISKGKLMQLEHIILSHHGELEWGSPVVPKTAEAFV
IHMVENMDAKLARFRSICQKEKKNGNTKLWSEFDKHLQRRIWLGGFDEED
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctcggtgacaaaatgccaaaagaattagttcaaaaagttgtttcaagctctctt
gaaaagtttcctttgctatccgatatcatgaaaaaactgaacgaaaatgtggaagttgtg
gcaaaaatttcaagcaaaaggcttcaagaaaccaaagatcagaaaaaacttttgcttttg
actttagtcgatagatcgggatctttaagagccgttgattggcacaacgctgaagagaat
tttgaaaaactcagcgaaggagatgtgatactggccaaaggtaggattgtctattttgaa
gatcatttgcagttaaaccttgataaatccaaagattcagttagagttatgcaagaagaa
gagtatgatatagaacgattcgttgaaacaacgcctgaagatattgaaaagcttcaaaga
aaactgaaagagttgatagacgatattcaagacaaagaaataaggaatttgctaaaagag
ttattcgaaaaagatgagcaattcttcagtaagttcatcaaagttcctgcaggagtaagc
gttcaccatacgtacattggtggacttcttgagcacaccgtagcggttgcaagtatttgt
aaaaaaatctggagtgtatatgagaacgctttgaacaaagatttgctgatagccggtgcc
atccttcacgacataggaaaagttcaagaatacacgataaccaaaaaaggttttgaggtt
accaccgaaggggagctaaaaagtcacattgcacttggggtagaaatacttcaaagcaaa
gccaaaaacgttcagatttccaaaggaaaattgatgcagctggaacacataattctctcc
catcatggggaacttgaatggggttctccggtggttccaaaaactgcggaagcttttgtg
atacacatggttgaaaacatggatgcaaaattggcgcgctttagaagcatttgtcaaaaa
gagaaaaagaacggtaacacaaaactttggagtgaatttgacaaacaccttcaaagaaga
atttggttggggggattcgatgaggaagattaa
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