Pseudothermotoga thermarum: Theth_0274
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Entry
Theth_0274 CDS
T01554
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tta
Pseudothermotoga thermarum
Pathway
tta03030
DNA replication
tta03410
Base excision repair
tta03420
Nucleotide excision repair
tta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Theth_0274
03410 Base excision repair
Theth_0274
03420 Nucleotide excision repair
Theth_0274
03440 Homologous recombination
Theth_0274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tta03032
]
Theth_0274
03400 DNA repair and recombination proteins [BR:
tta03400
]
Theth_0274
Enzymes [BR:
tta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Theth_0274
DNA replication proteins [BR:
tta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Theth_0274
DNA repair and recombination proteins [BR:
tta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Theth_0274
NER (nucleotide excision repair)
GGR (global genome repair) factors
Theth_0274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Acyltransf_2
nSTAND_NTPase4
Motif
Other DBs
NCBI-ProteinID:
AEH50373
UniProt:
F7YV74
LinkDB
All DBs
Position
275548..278229
Genome browser
AA seq
893 aa
AA seq
DB search
MAKLFLFDGTGLTYRAYYALDQSLSTSTGIPTNATYGVMRMMIKFLKENVKIGDCVAFVM
DKKTKTYRHEILATYKAQRKPAPDAMIQQIPYIQRAVEALGVKVLAYEGCEADDVIATLA
KKGRDIFDEVIIVSGDKDVLQLVDDKIKVFRPTKGISELELFDAKKVKERFGVEPSQIVD
LLALIGDSVDNVPGVKGIGEKTAVELVTKYGSIENIKQKIDPNSKVGKLILSNWEDAEKS
KKLVTLMTDLDLKVNWEELIYQGFKKEELAEFLKEMEFASIMKELGIYKTQEEEEGSYQS
VTSEEKFLELVEKIKKSQYFVIDLETDSLSPLDAKIVGFSVSLPSKVSYYVPIAHKQGPN
IRKELAFEKLKEILEDKSAKVVGQNLKYDYSVLRMHGINPVTPHFDVMIAAYLLNPDEKR
FSLDELALKFLNYKMISFEEIVKSSSPLFGPTTFADVSVEDATRYSAEDADVTRKLYELF
IVKLHEQDLTDVMEKIEVPLIPVLVEMELNGVYIDVDYLRSLSSKYATKMNQLADEIFRL
AGEVFNINSPKQIGYILFEKLKIKPKKRTPTGEFSTRADVLEDLIDEHPIVPLILEYRKY
QKLKSTYLDVLPQLVHPKTKRVHTSFHQTGTATGRLSSSDPNLQNLPTRHEEGKEIRKAI
VPQEKGWWILSADYSQIELRVLAHLSSDERLVQAFLNDEDIHALTASKIFKVDLKEVTPQ
MRSIGKLVNFSVIYGVSPYGLAQRTGLSYEEAQRFIKEYFELYPQVRSYIEKTINFAREK
GYVRTLFGRKREVPQLRSKDNYVRQEGERIAINTPVQGTAADIMKLAMIDVYKKIKENNL
KAKMILQVHDELVFEVPEDELEKVKEIVKTSMENVVKLLVPLKVEIEVGQSWE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactgtttctctttgatggtacaggtttaacttatcgagcatattacgctttg
gatcaatctttgagcacaagtacgggcatcccaaccaatgccacttacggcgttatgaga
atgatgataaagtttctgaaggaaaacgtcaaaataggcgattgcgtcgcctttgtgatg
gataagaaaacgaaaacttacaggcatgagattcttgcaacgtacaaggcgcagagaaaa
cctgctccagacgcgatgatccagcagattccgtacattcaacgggccgttgaagctctt
ggggttaaggttttggcttacgaaggatgtgaagcagacgatgtgatagcaactttggct
aagaagggaagagatatttttgatgaagtgattatcgtctcgggtgacaaggatgtattg
cagctcgtcgatgataaaataaaagttttcaggcctactaaaggcatctctgagctagaa
cttttcgatgcaaaaaaggttaaggaaagatttggcgttgaaccatctcaaatagtcgac
ttattggctttgataggagacagcgtcgacaacgttccaggtgttaaaggaataggtgag
aaaactgcggttgaattggtaactaaatatggaagcatcgaaaatataaagcaaaagata
gatccaaacagcaaggtcggaaaactgattctttcaaattgggaagatgccgaaaaaagc
aaaaaattggttacattgatgaccgatctagatctgaaggtgaactgggaggaattaatt
tatcaaggtttcaagaaggaagaacttgcagaatttctgaaagaaatggaatttgcaagc
ataatgaaagaacttggaatttacaaaacgcaagaagaagaagagggttcttatcaaagc
gtgacaagcgaagaaaagtttttggaattggttgagaaaataaagaagagtcaatacttt
gtcatcgatcttgaaaccgattctttatcgcctttggatgcaaaaatagttggattttct
gtttcccttccatctaaagttagctactacgttccgatagcgcataagcaaggaccgaac
atcaggaaagaattggcttttgaaaaactgaaggaaattttggaggataaatccgcaaaa
gtcgttggacagaatttgaagtacgactacagtgttttgagaatgcacgggataaatcct
gtcacaccacactttgatgttatgatcgccgcttaccttttaaatcctgacgaaaagagg
ttcagcttggatgaacttgccctaaagtttttgaactacaagatgataagttttgaagaa
atagtgaaaagttcatctccgctttttggtccaactacttttgccgatgtttctgtggag
gacgcaactagatactcagccgaggacgcagatgttacaagaaagctttatgagcttttc
atagtcaaacttcacgaacaagatttaaccgatgttatggagaaaattgaagtacccttg
ataccggttttggttgagatggagctaaatggtgtttacatagatgttgactatttgaga
tctttgtcgagtaaatatgcgacgaagatgaatcaattggcggatgaaatattccgcttg
gctggagaagttttcaacataaactctccaaagcaaatagggtacattctttttgaaaaa
ctcaagataaagccaaaaaagcgaacacccaccggggaattttccacaagagccgatgta
ctggaagatttgatcgatgaacatccgattgtgcctttgattttggaatacagaaaatat
caaaaactcaagtcgacttatttagatgtgctaccacagcttgttcatcctaaaacaaaa
agggtgcacacaagttttcatcaaacgggaactgccacaggaagacttagcagcagtgac
cccaatcttcaaaatcttcccacaaggcatgaagagggaaaggaaataagaaaggcaatc
gttccacaggaaaaaggttggtggatattgagcgccgattattcacaaatagaattgaga
gttttagcacatctaagctcggatgaacgtcttgttcaagcgtttttgaacgacgaagac
atacatgctctgactgcttcaaagattttcaaggtggatttaaaagaggtaacacctcag
atgagatcgattggaaaacttgtgaacttttcggtcatctacggtgtgtcaccgtatggt
ttggcgcagagaacaggtttaagctacgaagaagcgcagaggttcataaaagagtacttc
gagctctatccacaagttagaagttacattgaaaaaacgataaactttgccagagaaaaa
ggatacgttagaacactttttggtagaaagagagaagtaccacagcttagatcgaaagat
aattacgtaaggcaagaaggtgaaaggatagcgattaacacacctgtccaaggaacagct
gccgatataatgaaacttgcgatgatagatgtttataaaaaaattaaagagaataatctc
aaggcaaagatgattctgcaggttcacgatgaactggtctttgaagtcccagaggatgaa
cttgaaaaggtaaaagaaatcgtcaaaacaagtatggaaaatgtggtaaaattactagta
ccactgaaagtggaaatcgaagttggtcaaagttgggaatag
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