Pseudothermotoga thermarum: Theth_0557
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Entry
Theth_0557 CDS
T01554
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tta
Pseudothermotoga thermarum
Pathway
tta03420
Nucleotide excision repair
tta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Theth_0557
03430 Mismatch repair
Theth_0557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tta03400
]
Theth_0557
Enzymes [BR:
tta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Theth_0557
DNA repair and recombination proteins [BR:
tta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Theth_0557
MMR (mismatch excision repair)
Other MMR factors
Theth_0557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_11
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEH50646
UniProt:
F7YXK5
LinkDB
All DBs
Position
557855..559744
Genome browser
AA seq
629 aa
AA seq
DB search
MEQLTYLNDLDEEQKRAVLESTGRSIVIAGPGSGKTKVITYKLLHLLKTGVKPSQILLVT
FTRAAANEMIERARMLTGTDLDEITAGTFHHVCNLLLRKYAPKVGLLPNFTILDEEDSAS
LIKHVRTNVLERHGLKKSFPTHNVLQKIFSYSANTMTSLKEAILKIEPKFAQHESIIEEI
YREYSLEKRSQNCVDYDDLLTFAVQLLESDHNVLMKEASKYVWVLVDEFQDTNILQLKLI
EMLSSVHGNVMVVADDAQSIYSFRGARFENVSDFMKVKGTKLFKIQTNYRSSESIVKFIN
VMIPGKAVPKVLKSVKPNGVKPKLVYVSDPQQEAVFVTREVLKLIEFGFEPSQIAVLYRS
HSHSLDLQIELAKHRIDFRILSGLKFTETAHVKDVLAFLRILQNPKEKISWIRIAKLFPG
IGTKTASKLADFAAVCPETDPVKILEKLGEGKEAIWQMKELFELMQRQSRIDAMISVLNE
RFYSDYLLNNYPDHFERQQDINRLMEIASRYSSLERFLTDLTVSSDVNDETKPKNVLTLT
TVHQAKGLEWDVVFVLSVNPGDFPSYYAIVDNNIDEEERIFYVAITRAKQHLYIIKHGVN
RYSSIYWLRSVDFAQRIPKKLVEEIYFEG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttgacgtatctgaacgacttggacgaggagcaaaagcgagcggttttggaa
tctacaggtagatccatcgtcatagctggacctggttctggaaaaaccaaggtgatcact
tataaattgcttcatcttttgaaaacgggcgtaaaaccgtctcaaatacttcttgttact
ttcactagggcagctgcgaatgaaatgatagaacgcgcaaggatgttgactggaacagac
cttgatgaaataaccgctggtacttttcaccacgtttgcaaccttttgcttagaaaatac
gctccaaaggttggacttcttccaaatttcaccatacttgacgaggaagattccgcaagt
ttgataaaacacgttagaactaatgttctagaaaggcatggtttaaagaaaagctttccc
actcacaacgttttacaaaaaattttctcttacagcgcaaacaccatgacaagtttaaaa
gaagcgattttgaagatagaaccaaagtttgcacagcatgaaagcataattgaggaaatt
tatcgagaatattcactggaaaaacgaagtcaaaactgcgtggactacgatgacctttta
acctttgctgttcaattgcttgaaagtgatcacaacgttttgatgaaggaagcttccaaa
tacgtatgggttttggtcgacgagtttcaggatacaaacatactgcagttaaagcttata
gaaatgctttcttctgtacatggtaacgttatggttgtggcagacgatgcacaaagcatc
tattctttccgtggagctagatttgaaaacgtcagcgattttatgaaggtgaaaggcacg
aagttgttcaaaatacagaccaattacaggagctccgaaagcatagtaaagttcatcaac
gttatgattccaggcaaagcggtaccaaaggttttaaagtccgtaaagccaaacggtgtg
aaaccgaagttggtgtacgtgagcgatccacagcaagaggcagtctttgtcacaagggaa
gttctcaaattgattgaatttggctttgaaccatctcagattgcagttctttacagaagt
cactcccattcgttggatcttcaaattgagcttgcgaagcacaggatagattttagaatt
ctttccggcttgaagttcaccgaaacagcccatgtgaaagacgttcttgcgttcttaagg
atcctgcaaaatccaaaagaaaagatctcttggataaggatagcaaagctttttccagga
atcggtaccaaaactgcttcgaagttggctgactttgccgcggtttgccctgaaactgat
cctgtgaaaatccttgaaaagttgggggaaggaaaagaggcaatttggcagatgaaagaa
ctttttgaactgatgcagcggcaaagcaggatcgacgccatgataagcgttttaaacgag
cgcttttacagcgattatcttttgaacaattatccagatcattttgaaagacaacaggat
atcaaccgcttgatggaaattgctagtaggtacagctcccttgaaaggtttctcaccgat
ttgactgttagcagtgatgtaaacgatgaaacaaaaccaaaaaacgttttaaccttgacg
actgttcatcaggcaaaaggcttggaatgggatgtggttttcgttctgagcgttaacccc
ggtgattttccaagttattatgcgattgtggacaacaacatcgacgaagaagaaaggatt
ttctacgttgccatcacaagggccaaacagcatttgtacataataaagcatggggtcaac
agatattcttcgatttactggttgagatcggtggattttgctcaaagaataccgaaaaaa
ctggttgaagaaatttactttgagggttag
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