Pseudothermotoga thermarum: Theth_0806
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Entry
Theth_0806 CDS
T01554
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tta
Pseudothermotoga thermarum
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tta03400
]
Theth_0806
DNA repair and recombination proteins [BR:
tta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Theth_0806
Archaeal homologous recombinant proteins
Theth_0806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_27
SbcC_Walker_B
AAA_29
AAA_15
ABC_ATPase
ABC_tran
YabA
AAA_16
FtsK_SpoIIIE
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEH50890
UniProt:
F7YY71
LinkDB
All DBs
Position
complement(787933..790476)
Genome browser
AA seq
847 aa
AA seq
DB search
MRPVSIKVENFLGIKYANVEFEQGVFLIVGKNGAGKSSLLEAMVFALYGAGVRYGRQSPK
SYVRTGSDFCQVQFTFLKNGKKYQIIRRVSENGHQAKLLENNKVIATQRSAVDDFVQKII
GASYDSFITTFLLPQGMATELLTASWSKIEEVIFDVLFPKKVLKTVQEKIAEKFQEAKTQ
HEIKQFELSSLRKQLEDLSAKTNKEKILQYEEYLKQIEQQLSKLELEHEIVKKAAETWKE
IDQLDQQIAELEKLEKDLAQKAEKEQKIIVAKQLEAIYIRYKNDKELVQQTLQERRKTVD
KLDKLQSQLEQTKLQINEKSNRLNDLNSLYETLRVKLDNLTKIRQNSEPILQKIVQLAAE
KRKLEEYLSQIKRKSQDVKERIERKKQDLQKLYTASEDLNNEIQSMNNVAIAKMASLIAQ
HLAVGDRCPVCGNEYKGQPPIQAEINLGLYEQKLKQLEDLKGQIVAIESELAVLNKQFDS
LTSDEIKLNVELEEKNQMIRTLQEDLVKEGYYQNLTKDIDELSKKLESVTKEKSLVESQI
SSLLESKNQITQRIEEIREELKLLDDKLKLLQERAKESETAFFEELDKASLTFEDFEKLR
NLKVENALEQLKNIQIRLNDCKQRKNQLLSQMTVDRSTTYKKLAELGEEIQKLKKQRDLV
INEKAVTQHLLNQIEELELKKQRCEQEYQTVYEKYQVYSLVKSTFGAKEFQAYVAKVALD
QILTLANQHLNVITDGRFQLGIGPNGFVIRDFGVIRHADGLSGGEKTIVSLALAMAIAEA
TLGEMEAFFVDEGFSALDSENKSKMASVLKGMEKLNKVVGFVTHDPEFAEYFSRKLVVEK
GGVVRWM
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
ttgagaccagttagtataaaggtggagaattttttgggaataaaatacgcaaatgttgaa
tttgaacagggagtttttctgatcgtgggaaaaaacggggcaggaaaatcttctttactc
gaagcgatggttttcgcactttatggtgcaggcgttaggtatggccggcagagccctaaa
agttatgttcgaactggtagcgatttttgccaggtacaattcaccttcctcaaaaatgga
aaaaaataccaaataataagaagagtgagcgaaaatggacatcaagccaaacttctggag
aacaataaggttatcgccactcaaagaagcgctgtcgacgactttgttcaaaagattatt
ggagcttcttacgatagtttcataacgacgtttttacttccccagggaatggctacagaa
ctcttgacggccagttggtcgaaaatagaagaagtcatattcgatgtgctttttccaaag
aaagtgttgaaaactgttcaagaaaagattgcagaaaaatttcaagaggcaaaaacgcag
cacgaaattaaacaatttgaactgtcatcgcttagaaaacaattagaagatctaagtgca
aaaacaaacaaagaaaaaattctacaatacgaagagtacttaaaacaaattgaacagcaa
ctttcaaaactcgagttagagcatgaaatcgtcaaaaaagctgcagaaacgtggaaggag
atcgatcaactggatcaacaaatagcagaacttgaaaaactcgaaaaagatttagcgcaa
aaagccgaaaaagaacaaaaaatcatcgtagctaaacagctggaagcgatttacattagg
tacaaaaacgataaagaacttgtccagcaaactttgcaagagagaagaaaaaccgttgac
aaactcgataaacttcagtcgcaacttgaacaaacaaaattacagatcaacgaaaaaagc
aatcgtttgaatgatttgaacagtctctatgaaacattaagggtaaagttggacaacttg
acaaaaatacggcagaattcagagccgatacttcaaaaaatagttcaacttgccgccgaa
aagagaaaacttgaagaatatctaagccaaattaaaagaaaaagtcaagacgtcaaagag
cgaatcgaaaggaaaaaacaagatcttcaaaaactttacactgcgtccgaggatttaaac
aacgaaattcaatccatgaacaatgtggcgattgcaaagatggcttctttgatagctcaa
catcttgctgtgggagatcgatgcccagtttgtggcaacgaatacaaaggtcaaccgcct
attcaagctgaaataaaccttgggctttacgaacaaaagctaaagcaacttgaagatcta
aagggccaaattgttgcaatcgaaagtgaacttgcagtattgaacaagcagttcgatagt
ctaacaagtgatgaaataaaactcaacgttgagttagaggaaaaaaatcaaatgattcga
acactacaagaggatttggttaaagaagggtattaccaaaatctaacaaaggatatcgat
gagctgtctaaaaagttagaaagtgtgacaaaagaaaaatcccttgttgaaagtcaaatt
tcgtctttactagaatcaaaaaatcagataacacaaaggatagaagaaattcgagaagaa
ttgaaattattggatgataagttgaaattgcttcaagaaagggcaaaagagagcgaaaca
gcctttttcgaagaacttgacaaagcgagcttgacttttgaagatttcgaaaaactcaga
aatttaaaagtggaaaacgccttggaacaactaaagaacatccaaattcgattaaacgat
tgtaagcaaaggaaaaaccaattgttgagtcaaatgaccgttgacagatctacaacttat
aaaaagttggcagaattgggtgaagaaattcaaaaattaaagaaacaaagggatttagtg
ataaacgaaaaagccgtgacacaacatttgttgaatcaaatcgaagaattagaattgaaa
aaacaaagatgcgaacaagaatatcagactgtttatgagaaatatcaagtctacagtttg
gtgaaatcaacgtttggtgcaaaagaattccaagcttatgttgcaaaagtcgccttagat
cagatattaacgcttgccaaccaacatttgaacgtaataaccgatggcagatttcagctt
ggtatagggccaaatggattcgtaatacgcgattttggagttataagacatgcggatggt
ttatcaggaggagaaaaaacgattgtatccttagctcttgcaatggcaatcgcagaggca
actttgggagaaatggaggctttctttgttgatgaaggtttctctgcgttggattctgag
aacaaatccaaaatggcttcagttttgaaaggaatggaaaagctgaacaaagtggttgga
tttgtcactcatgatcccgagtttgcggagtacttttcgcgcaaattggttgtcgaaaaa
ggtggtgtggtgcgatggatgtag
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