Pseudothermotoga thermarum: Theth_0862
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Entry
Theth_0862 CDS
T01554
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tta
Pseudothermotoga thermarum
Pathway
tta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Theth_0862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tta03021
]
Theth_0862
03400 DNA repair and recombination proteins [BR:
tta03400
]
Theth_0862
Enzymes [BR:
tta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Theth_0862
Transcription machinery [BR:
tta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Theth_0862
DNA repair and recombination proteins [BR:
tta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Theth_0862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
NQRA_N
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AEH50946
UniProt:
F7YYC5
LinkDB
All DBs
Position
839338..844281
Genome browser
AA seq
1647 aa
AA seq
DB search
MAISTFKRKIAAVKIGVASPDVIRSWSSGEVKKPETINYRSFKPERDGLFCEKIFGPTKD
YECACGKYKGKKYEGTVCERCGVRVESKEARRRRMGHIELAAPVVHIWYLKSSPSIIATL
LNMNIRDLENITYYGSKRIIEKFYLVTDPKKTNFSKGDVLYQSEYEIYSRALDFEVERAV
KIKNPKAPLVSDIDGEVKIKVEKTHTGREITWIYVRRLHKTPIQLQPGMILLVKNNQQVR
KGQLLVSEKQIPAFYAPFDGTVEIDELASALTLKPLTTSKEQPITVTIPYCVRVMAKNGA
KVKAGEQLLSAGQIQPIECPEDGTVVFGKDLNVKPLEDGTYEVLSAGQIFVESLIEERAY
PVFEGAFIQVNDGDTVKAGDYLAERFLFEDEILTMTEYKIFEQHYPGQFSIEVEEENDKA
IVAITEIDEELSKLTGLQVGSIITENEYEAYKELYPGKIEAHYGAAAIKKLLEKIDLEKL
KAQIEAELASTPRSSGRALKLLRRLKIVKDLIKSGTRPEWMVLEVLPVIPPDLRPMIQID
GGRFATTDLNDLYRRVINRNNRLRRFLEIGAPEIIVRNEKRMLQEAVDSLLYNGRIGKPV
TDRNGRPLKSLTDLVKGKKGRFRRNLLGKRVDYSGRAVIVVGPNLKIHQCGLPKKMAMEL
FKPFVYAKLLEGGIDSSKSRKMKRRIIEKEMPEAWDVLEEVIKGQLVLLNRAPTLHRMSI
QAFEPKLIEGNAIQLHPLVCPPFNADFDGDQMAVHLPLSAAAQAEARYLMLSRYNIISPA
HGKPISMPGKDIIVGLYYLTAVGKDFEKVQPKFKFSCPEEAILAYSLGYVGLHEPVLAKV
KIGDEEKIVKTTVGRIIMNEVIPPDLRDYSATFDKKVIKNVIYDTFKKHGVEMTADLLDA
MKDLGFHYATLSGLTMSLKDLVISPLKDKIIEEAKKKVDYIERQYQEGFLTYEERYQEII
KVWSKATEQVQKITYEALGEDPFNPVFMMVNSGARGNIDQVKQLAGMRGLMADPAGRTIE
IPIISNFRQGLSSMEFFISTHGARKGAADTALRTSQAGYLTRRLVDVAQAVVVSTTDCGT
EDGLKAMELVSIDNLTVQKLKDFLFGRVLAKDVVNPLTGEIVKNPKTGKEYVRNTMLSDE
DAEFLADYSLVVPVCEEKILDLHSLQLPHAYAEIAEDIFAPDGTHFEAGTELTWEVIRVA
RNAGKKELKVKVYPVVGTVCLETVYDSKKSKQLTVYQEEIDEVIAKVLEENNVTQLRVRP
NIYVRSPLTCTAEKGVCAMCYGMDLSSHKIVNVGEAVGIIAAQSIGEPGTQLTMRTFHTG
GIATAADITQGLPRAEELFEARKKLRDPEAAFSLVTGIVKDIKEVDGKKKIYVEDFSGQI
HEYEVPEKTKERVKPGDKVLPGTQLTTGSIRLRKLMDTLGVEATAMYLLRETQKVYVEQG
VEIHDKHFEIIIRQMLGKVEVIYPGDTDYLPGQLLPLIEVEKINKAIIEANAEVQNNRKL
VIGKTLAKKIVAKVGDSIEEIAPEGAEVTEEILEKAINFGVKEISVYEKGRVETYQILPK
EPIQYRRRVLRITKASLEQKGWLSAASFQQTPQVLTEAAIEGRIDYLEGLKENVIVGQLI
PAGTGLEIFANIQIEETPRAAEAEKLA
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcgactttcaaaagaaaaattgccgctgttaagataggtgtcgcctcccca
gatgtcatccgaagctggtctagtggagaggtaaaaaaaccagaaacgatcaattaccgt
tccttcaagccggagagggacggcttgttctgtgaaaaaatattcggtcccacaaaagac
tatgaatgcgcctgcggaaagtacaaaggcaaaaaatatgaaggtacagtttgcgaaaga
tgtggagtgcgcgtcgaatcgaaagaagcaagaagaagacgaatgggacacattgaatta
gccgcaccagttgttcatatatggtacttaaaaagcagtcctagcataatcgccactttg
ctgaacatgaacatacgtgatttggaaaacataacttactatggaagcaaaagaataata
gaaaagttctacttggtcacagatccaaagaaaacgaatttctcgaagggcgatgtgctc
tatcaatctgaatacgaaatatacagtagggctttagactttgaagttgaaagagcagtc
aagattaaaaatccaaaggctcctcttgtatcggacatagatggtgaagtcaaaatcaag
gttgaaaagacacacacaggacgagagataacttggatatatgtgagacgtttgcataaa
acaccaatacaacttcagcctggaatgattctccttgtcaagaacaatcaacaagttcgc
aaaggacagcttttggtttctgaaaagcagattccagccttttatgcaccgtttgatgga
acagttgaaatagatgagctggcctcggcattgactttgaaacccttgacaaccagtaaa
gagcagcctatcacagttaccattccttattgcgtgagagttatggcaaaaaatggtgca
aaagtgaaagctggtgaacaactcttatccgctggacaaattcaacctatagagtgtcca
gaggatggtacggttgtcttcggaaaagatttgaacgtcaagccgcttgaagatggaaca
tacgaagttttgtcggcaggacagatcttcgttgaatctttgattgaagaaagagcctac
cctgtttttgaaggagctttcatccaggtaaacgatggcgacaccgtgaaggcaggagac
tatcttgcagaaagatttctcttcgaggacgaaattttgacaatgactgaatacaaaatc
ttcgagcaacattatcctggacaattttcgattgaagtggaggaggaaaatgacaaagct
atagttgcgattaccgaaatagacgaggaactatcgaagttaacaggtttgcaagtggga
tctataatcaccgaaaatgagtatgaggcttacaaagagctttatcctggaaagatcgaa
gctcactacggtgcagcggcaatcaaaaaattgctggagaaaattgatttggaaaaactc
aaagctcaaatcgaagcagagttagcttccacaccaagaagcagtggaagagctttgaag
cttttaagaaggttgaagatcgtcaaagatttgataaaatccgggacaagacccgagtgg
atggtgctcgaagttctgccggttattccaccagatctaagaccaatgattcagatagac
ggtggcagatttgccacaacagatttgaatgacctttatcgtcgcgtcatcaacaggaac
aacagattaaggaggttcttggaaattggagcaccagagataatagttagaaatgaaaaa
agaatgctacaagaagctgttgatagtttgttgtacaacggtagaataggaaaacctgtg
actgacaggaatggcaggccgcttaaatcactcactgaccttgtcaagggtaaaaaaggt
aggttcagaagaaatcttctaggtaaaagggttgattactctggtagagcagttatcgtt
gtaggaccaaatttgaagatacatcaatgcggcttaccaaagaaaatggcaatggagctc
tttaaaccgttcgtgtacgcaaaactgcttgaaggcggaatagattccagtaaatcgaga
aaaatgaagagaagaataatcgaaaaagaaatgccggaagcttgggacgtgcttgaggaa
gttataaaaggtcaattggttctactcaacagagcaccgactttgcacagaatgtcaata
caagcgtttgagccaaagttgatagaaggtaacgccatacagttacatccacttgtttgc
ccaccgttcaacgcagattttgacggagaccaaatggccgttcatttgccgttgtctgct
gcagctcaagctgaggcaaggtaccttatgctttcacgttacaacataatttctcctgct
catggtaaacccatttcgatgccgggtaaggatataatagttggtctttattatctaaca
gctgttggaaaagattttgaaaaagtccaaccaaaattcaaattcagttgtcctgaagag
gccatacttgcttattctttaggttacgttggattgcacgaacctgtacttgcaaaggta
aaaataggtgacgaagaaaaaattgtcaaaacaaccgttggaagaatcatcatgaacgaa
gtgatcccgcctgatctgcgtgattattcagcaacttttgataaaaaagtgataaagaac
gttatttacgataccttcaagaaacatggtgttgaaatgaccgcagatcttttggatgcc
atgaaggatcttggtttccactatgctactttgtcgggtttgacaatgtctctcaaagat
ttggtcatatctcctttgaaagacaaaataatcgaagaggccaaaaagaaagtggattac
attgaacggcaatatcaagaaggattccttacctacgaagaaagatatcaagaaatcatc
aaagtctggtcgaaagccacagaacaagttcaaaaaataacctatgaagcactaggagaa
gatccgttcaatccagttttcatgatggtcaactctggagcaagaggtaacattgaccag
gtaaagcagcttgctggaatgagaggtttgatggctgatccagctggtagaacgatagaa
attcctataatatccaacttcagacaaggattgtcaagcatggagttcttcatatcaaca
catggtgcaagaaagggagctgctgacacagctttgagaacttcgcaagccggttatctg
acccgcaggttggttgatgttgcacaggcagttgtggtttcaacgactgattgcggcaca
gaagatggcttgaaagcaatggaactggttagcattgataatctcaccgttcaaaaactc
aaggactttttgttcggtagagttttggcaaaagatgtcgttaatccgttgactggtgag
atagttaaaaatccaaaaaccggcaaagagtatgtgagaaacaccatgctatccgatgaa
gatgccgaatttttggccgattactcattggttgtaccggtttgcgaggaaaaaatcttg
gatttacacagccttcaattgccacatgcttatgctgagatcgctgaggatatctttgca
ccggatggaacacactttgaagctggtacagaacttacatgggaagtgatcagagtagca
aggaatgcaggcaagaaagagttgaaggtgaaggtttacccagtggtcggaacagtttgt
ttagaaacagtttacgatagcaagaagagcaagcaacttacggtctatcaagaagaaata
gacgaagtaattgcgaaggttttggaagaaaacaacgttacgcaactgagagttagacct
aacatttacgttcgctctccattgacttgtacagctgaaaaaggcgtttgcgctatgtgt
tatggtatggatctatccagccacaagatcgttaacgttggtgaagccgttggtataatc
gcagctcaatcgataggagaacctggtacgcagcttaccatgagaaccttccacactggt
ggtatcgccacagcagctgacataactcaaggtttgccacgagcagaagagctgttcgag
gctcgcaaaaaactaagagatccagaagcagcattcagtttggttaccggtatcgtgaaa
gacattaaagaagttgatggcaaaaagaaaatctacgttgaggatttctcaggtcagatt
cacgaatacgaagttccagagaaaacgaaggaacgcgttaaaccaggcgacaaagtcctg
ccgggtactcaactaacaactggatctataagacttagaaaacttatggacacactaggt
gtcgaagcaacggcaatgtacttgcttagggaaacccaaaaggtttacgtagagcaaggt
gtcgaaatacacgacaagcactttgagattataatcagacaaatgcttggaaaagttgaa
gtaatttatccgggtgatacagattatctacctggtcagttgttaccgctcattgaggtt
gaaaagataaacaaagcaataatcgaagccaatgcagaagtgcaaaacaacagaaaactt
gtgataggaaaaactcttgccaagaaaatcgttgcaaaagttggagattccattgaagaa
atagcacctgagggtgcggaggttaccgaagagattttggaaaaagccatcaattttggc
gtcaaagaaataagcgtctacgaaaaaggtcgcgttgagacctaccagattctgcccaag
gaacctattcaatacagaagaagagttttaaggataacaaaggcatctcttgaacaaaaa
ggttggttgagtgcagcttcgttccagcaaacgccacaggtactcactgaagctgcaata
gagggtcgtatcgattatctagaaggtcttaaagaaaacgtgatagttggtcaattgatt
cctgctggaactggacttgaaatctttgccaacatacaaatcgaagaaacacccagagca
gcagaagcggaaaaacttgcttga
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integrated database retrieval system
