Pseudothermotoga thermarum: Theth_1680
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Entry
Theth_1680 CDS
T01554
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tta
Pseudothermotoga thermarum
Pathway
tta03410
Base excision repair
tta03430
Mismatch repair
tta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Theth_1680
03430 Mismatch repair
Theth_1680
03440 Homologous recombination
Theth_1680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tta03400
]
Theth_1680
DNA repair and recombination proteins [BR:
tta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Theth_1680
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Theth_1680
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Theth_1680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEH51727
UniProt:
F7YVR1
LinkDB
All DBs
Position
complement(1696670..1699606)
Genome browser
AA seq
978 aa
AA seq
DB search
MRWIVKHVPQEQVDLLSQQLGISEFLAKLLINRGLTDHEQVIRFLNPTKQDLHDPNLLLD
MDKACELLLHAREQKFPVLVYGDYDVDGITGTAVLEEFLLSNGWLAFHYIPKRLDEGYGV
QPEVVKQFVQSGGRLIITVDCGITAVESVNLANSLGCKVIITDHHEVGPVLPAAEAIINP
KRPNDPYPFKDLAGTGVAFKLVCALAERLGLPLEYVFEYLDLVALGTVADMVKLIDENRF
IVKKGLEMMKKTKRPGLDVLLFRLGIDEPDSRDIGYRVAPKLNAAGRLDYAEDAYRLLAV
KDRQTAMDLVNLLFEYNTARQEIESEIYSMAVEQIEELELHKNSIIAVCGENWHVGVLGI
VATKLCQRYGKPVLVISVGEDEARGSARSPENINLIEILQPFSSYFKEFGGHPFAVGFTI
DLSILDSFIESLKDYQIPIAESSDTIEIDCEVDLSQIDQNLVEQLKILEPFGNGNPEPVF
ILKNAVIENPKTFGQGESNAKFFVTDGVKKFEALGFGLGHLFEKSHLNGSLKGDLVFTIK
KNGEQLSLNVLDLVLDLQESGLTKQNKRPSISHKWLQLEEILANLKGREFFAVDIRTRNF
IYKWLAENDKRKIMIVSPNNIIALQTYQSLLRYVDSTLDFLNSLNKVPSQRMGFSTVVYF
VEQFEKFLQMYDLVIVNELALFKTFSKNQYVSKFLQLVKDNPTKFAAVSVKFSEDLYDFA
VDLGFYLTYQRIIKPTFGLVEVPSLETVLDEACCFLFSSKSKLADFYKKVSHVWKASDLI
VYTHNLKPQQKALVLNQIKKRKFKKLLCVTNTDGIPAMLWQDAEIAIGDVPLSLFEIMDS
LSFDGSSQIVDLCFDLKDVEIREQELKELFPTKEYIGQILKMFKNEEIDENKFIETLVEN
NFLKNSAYGKVLISVMKELGAVVKDGKIDLSKVDLSKHSLRMAEGQLDTAYFESVTKWYL
LQKAKGICKALMNPKVVI
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtggatagtaaagcacgttcctcaggagcaagttgatcttttatcgcagcagctt
ggtataagtgaatttctcgcaaagcttttgataaaccgaggcctaaccgatcatgagcaa
gtcatacgttttttgaatccaaccaagcaagatcttcatgatccaaacttgctgttggac
atggacaaagcgtgcgaacttttgctccatgcaagggagcaaaaatttcccgtacttgtt
tatggcgactacgatgtggatggcataaccggtactgcagtacttgaggaatttttgctt
tcgaatggttggcttgcctttcactacataccaaagcgtttggacgaaggatacggggta
cagccggaagtggtaaagcagtttgtgcaaagcggtggaaggttgataatcaccgttgac
tgcggtataaccgccgttgaatcagttaatttggcaaactcgcttggatgcaaagttatc
ataactgatcatcacgaggtaggaccagttttaccagccgctgaagccataataaatcca
aaaagaccaaacgatccttatcccttcaaagatctggctggaaccggcgttgccttcaaa
ttagtttgtgcccttgcagaaaggcttggcttaccgcttgaatatgtattcgaatacctt
gatcttgttgcacttggaactgtggctgatatggtaaaactaatcgatgaaaatagattt
atagtcaaaaaaggccttgaaatgatgaaaaaaacaaaaagaccaggacttgatgtgctt
ttgttccgccttggtatagatgaacctgattcgagggatataggttatcgagttgcacca
aagttgaacgccgccggcaggcttgattatgccgaagatgcctatagacttttggctgtc
aaagatagacaaaccgcgatggacttggttaatcttttgttcgagtacaacacagctcga
caagaaatcgaaagtgaaatttactccatggcagttgaacaaatagaagagcttgagctt
cacaaaaactcgatcatagcagtttgtggtgaaaactggcacgttggagtacttggcata
gttgcaaccaaactctgtcaaagatacggaaaacctgtgcttgtaatttcggttggagaa
gatgaggcacgtggttcagccagaagccctgaaaatataaacttgatcgaaattcttcaa
cctttctcaagctacttcaaagaatttggaggtcatccttttgccgttgggttcacgata
gatttgagcattttagattctttcatcgaaagcttgaaagattatcaaataccgattgcg
gaaagttctgacacaattgaaatagactgtgaggttgatttgagtcaaatcgatcaaaat
ttggttgagcaacttaagatacttgaaccgtttggaaatggtaatccagaaccagttttt
atcttgaaaaatgcagtcattgaaaacccaaaaacctttggtcaaggcgaatccaacgca
aagtttttcgtgactgacggtgttaaaaaatttgaagctttaggatttggtcttggacat
ctttttgaaaaatcccatttgaatggatctttaaaaggcgacttggttttcacgataaag
aaaaacggggaacaattgtccttgaacgttttggaccttgtccttgacttacaagaaagc
ggtttgacaaaacagaataaaaggccatcgatcagccacaaatggttgcagcttgaagag
attcttgcaaacttaaaaggtcgcgaattttttgcagtggacataagaacgagaaatttc
atatacaaatggctcgccgaaaacgataaaagaaaaatcatgatcgtttcgccgaacaac
attatcgctttgcaaacttaccaaagccttctgaggtatgtcgatagcaccttggatttt
ctcaactctttgaacaaagtaccgtcgcaaagaatgggattttcaactgttgtgtatttt
gtcgaacagtttgaaaagtttcttcaaatgtacgatttggtgattgtaaacgaacttgca
cttttcaagactttttcaaaaaaccagtacgtttcaaaattcttgcagttggtaaaggac
aacccaaccaagtttgccgccgtgagtgtaaaattttccgaggatttgtacgattttgca
gtggatttgggattttatctgacttatcaaaggatcattaagccgacctttggactggtt
gaagttccttctttggaaacagttttggatgaagcctgttgctttctgttttcatcgaaa
tcaaaactagccgatttttacaaaaaagtatcccacgtttggaaagcctcagatctgatt
gtttacacgcacaacttaaagccgcaacagaaagccttggtgttgaatcaaataaagaaa
agaaaattcaaaaagcttttgtgtgtgaccaacaccgatgggatacctgccatgctttgg
caggacgctgaaatagcaattggagatgttccactcagcctttttgaaatcatggacagt
ctttctttcgacggatcaagtcaaatagtggatctttgttttgatctgaaagatgtggag
atcagagaacaagaattgaaagaacttttcccaacgaaagaatacattggacaaattttg
aaaatgttcaaaaacgaagaaatagatgaaaataaattcatcgaaacacttgttgaaaac
aactttttgaagaattctgcttacggaaaggttttgatatccgtgatgaaagagcttgga
gcggttgtaaaggatggaaaaatagatttaagcaaagtagatctttcaaagcactctctt
agaatggcagagggacaactcgacacagcttactttgaaagcgtgacaaagtggtacctt
cttcaaaaagcgaagggaatttgcaaagctttgatgaatccaaaagtggtgatttaa
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