Thalassospira tepidiphila: MACH01_00960
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Entry
MACH01_00960 CDS
T09750
Name
(GenBank) catabolite gene activator protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb02020
Two-component system
ttb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MACH01_00960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MACH01_00960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ttb03000
]
MACH01_00960
Transcription factors [BR:
ttb03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
MACH01_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
Crp
MarR
HTH_24
GntR
HTH_11
HemN_C
TrmB
HTH_DeoR
Sigma70_r4
DUF5817_CT
LexA_DNA_bind
HTH_3
DUF1670
Motif
Other DBs
NCBI-ProteinID:
BDW87329
LinkDB
All DBs
Position
complement(119050..119793)
Genome browser
AA seq
247 aa
AA seq
DB search
MNPVNSVTGPKSPQLAKIASRILAGSFLFEDLDPELLEQLSNQATVRRFDDGQLLFEKGA
PADGLYAVEAGKVRISSVSETGKEIVLNVLAPGAVFGEIALLDGEPRTATARAVGPTRTL
FISRDDFFEIFDREAPLRRHITALLCRRLRWVSDLLEDANFLDLTARLIKRILWLAERHG
GPDPEGIRIALPLSQQELGLMLGVTREAVNKKLRELEKQGMITRRDGRLVVKDSEGLKQL
LADAVKN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccccgtgaacagtgtaaccggcccaaaatcaccgcaacttgcgaagattgcttcg
cgcattctggcaggcagcttcctgtttgaggatctggaccccgaactgttggagcaactg
tcaaaccaggcgactgtccgccggttcgatgatggccagttgctgtttgaaaagggcgca
ccggcagacgggctttatgcggttgaggccggcaaggttcgcatttcgtcggtttcggaa
accggcaaggaaatcgttctcaacgttctggcacccggtgcggtatttggcgagatcgca
ttgctggacggtgaaccgcgcaccgcgaccgcacgggcggttggcccgacccggacactt
ttcatttcgcgcgatgacttctttgaaatctttgaccgcgaagccccgctgcgccgtcac
atcaccgcccttttgtgccgtcgtctgcgttgggtcagtgacctgcttgaagatgccaac
ttccttgatctgaccgcgcgtctgatcaagcgtatcttgtggctggctgaacgtcatggc
ggcccggacccggaaggcattcgtattgccctgccgctgtcacagcaggaattgggcctg
atgctgggtgtgacccgtgaagcagtgaacaagaagctgcgcgaacttgaaaaacagggg
atgatcacgcgccgtgatggtcgactggtcgtcaaggacagcgaagggctgaaacaactt
cttgctgatgccgtcaaaaactga
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