Thalassospira tepidiphila: MACH01_03890
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Entry
MACH01_03890 CDS
T09750
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ttb
Thalassospira tepidiphila
Pathway
ttb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH01_03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttb03019
]
MACH01_03890
Enzymes [BR:
ttb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MACH01_03890
Messenger RNA biogenesis [BR:
ttb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MACH01_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
DUF8067
Motif
Other DBs
NCBI-ProteinID:
BDW87622
LinkDB
All DBs
Position
444501..445871
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AA seq
456 aa
AA seq
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MALDMTGGNKAAMTALEVTGRLRPYGIMVADDTARVFDAIAQQGGCARFVGGVVRDALLK
RDLVDVDIACDLAPEETQAALENAGIRVIPTGLKHGTVTAITDAGAYEITTLRVDVLTDG
RHAEVAFTDSWLEDAKRRDFTFNAIYCDLDGTIYDPFDGETDLRDGRVRFIGVAENRIAE
DFLRILRFFRFQAWFGRPPIDPVGAEACRKAVNGLHDISVERIRDEMFKLLRSRSPAGTI
NDMIGFGILPAILPKLIHTDCLRIMQWLDSTALADPAIQPDPLRRLAALFAPGGDRRNSD
DDEDNLAAAERFARDLRLSNEETDRFAEMVAHAPLIDPKLRPEIVRRDLYRMGSPAFRDA
VLLAWSARAAVPPRCTRAENDEWKALIEAAANWQPVKLPIQGRDILKAGLAPAGPRVGAL
LRQAEEYWIDRDFQPGRDELMDYIARQITAGDEEKE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggcacttgatatgacaggtggcaacaaggcagcgatgacagcactcgaagtaaccggc
agattgcggccatacgggatcatggtcgccgatgataccgcccgcgtgtttgatgccatt
gcgcagcaaggtggttgtgcgcgctttgtcggtggtgtcgtgcgcgatgcgttgcttaaa
cgtgatctggtcgatgtcgatattgcctgcgatctcgcgcctgaggaaacgcaggctgcg
ctggaaaatgcgggtattcgtgtcattcccactggcctgaagcacggaactgtcacggca
attactgatgccggggcctatgaaatcacgacgttgcgtgtcgatgtcctgaccgatggc
cgccatgcggaggtcgcctttaccgacagctggcttgaagatgccaagcgccgcgatttc
acctttaacgccatttactgcgaccttgatggcacgatctatgacccgtttgatggcgaa
accgatttacgcgacgggcgcgtgcggtttattggcgtggccgaaaaccgcattgccgag
gatttcctgcgcatcttgcggtttttccgctttcaggcgtggtttggacgcccgccgatt
gatcccgtcggggcggaagcctgccgcaaggcggtaaacggccttcatgatatttcggtc
gaacgtattcgcgacgagatgttcaagcttctgcgctcgcgcagtcctgccggcacgatc
aatgacatgatcgggtttggcattctacccgccattctgcccaaactgatccacaccgat
tgcctgcgcatcatgcagtggcttgatagcaccgcccttgccgatccggcgatccagccc
gatccgttgcgccgtcttgcagcactgtttgcgccggggggcgatcgacgtaacagcgat
gatgatgaagacaatctggcagcagccgaacgctttgcgcgtgatttgcgattgtcgaac
gaagaaaccgaccgtttcgccgaaatggttgcgcatgcgccgctgattgatccgaaattg
cggccagaaatcgtgcgccgcgatctgtaccggatggggtcacccgcatttcgtgatgcg
gtgctcttggcgtggagtgcacgcgccgcggtgccaccacgttgcacacgcgcagaaaat
gacgaatggaaagccttgattgaggccgcagcaaactggcaacccgtgaaattaccaata
cagggccgcgatattctgaaagctggccttgcacctgcggggccgcgtgtcggggcgctt
ttaagacaggccgaggaatactggatcgatcgcgatttccagcccggtcgggatgaattg
atggactatattgcccgccagatcacggcaggcgatgaggagaaagaatga
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